| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is pgl [H]
Identifier: 124025516
GI number: 124025516
Start: 746651
End: 747367
Strand: Direct
Name: pgl [H]
Synonym: NATL1_08091
Alternate gene names: 124025516
Gene position: 746651-747367 (Clockwise)
Preceding gene: 124025515
Following gene: 124025517
Centisome position: 40.04
GC content: 36.68
Gene sequence:
>717_bases ATGACTAAATATGAAATTCAAGTTTCAGAGGACAAAAGCTCTCTCGCTCTTGCCGCCTCTGATTTGATAACTCAGATCAT TGAGTCAACCTTGAAAAATAAAACCAGAGCTAAAATCTCTCTTTGTGGTGGTTCTACACCTAAAGCTGCTTATTCTTTGT TAGGTAAAAAAAATATCGATTGGATGAATGTCGATTTGTTTCTTGGAGATGAAAGATGGGTTGACAATAAATCACAAGAA AGTAATTGCTTTCTATTAAATAATTCATTGTTTAAAGAAGGCAACCCATCTCTAGAAGCATCATTTTTTGCTGTTTCAAC TGTTGAGTTATCATCCCCAGACGAAAGCGCTGACGTTTACGAAACAATCTTGAAAAATAACTTTGCTGGGGATCCACCAA GATTTGATTTGATTTTATTGGGATTGGGAGATGATGGGCACACAGCATCCCTATTTCCTGGCTCTGAGGCATTATTTGAA AGAGATAGCTTGATAACTGCTGGCGAAGGTAAAGGTCACAAAAGAATTACTTTTACCAGTAAATTATTAAGTGCTGCAGA TAATGTGGTCTTCCTAATCAGTGGATCTTCTAAACAAACGGCTCTTAAACGTCTACTTGATCCATCAGAATCATGGGAGA GAACTCCTGCAAAATTAGTTGCACCAAATTCTGAAATTATTGTTTTGGCTGATAAAGATGCTTACCCATCTTTTTAG
Upstream 100 bases:
>100_bases AAAACCTAGTTCAAGCAATGAGAGACTGTTTTGGCTCTCATACATATGAGCGCGTAGACAAGGCTGGATCATTTCATACT GAGTGGATTGACTGATATCA
Downstream 100 bases:
>100_bases TTAGATTATTGTATTAGTAGAGAAGTACTTTTTAATTGATTCCTGATTCACCCCCAACTGAAATTGCAATAACTCCTCTT ATACAGGGTTCTGAATTTTC
Product: putative 6-phosphogluconolactonase (DevB, Pgl)
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTKYEIQVSEDKSSLALAASDLITQIIESTLKNKTRAKISLCGGSTPKAAYSLLGKKNIDWMNVDLFLGDERWVDNKSQE SNCFLLNNSLFKEGNPSLEASFFAVSTVELSSPDESADVYETILKNNFAGDPPRFDLILLGLGDDGHTASLFPGSEALFE RDSLITAGEGKGHKRITFTSKLLSAADNVVFLISGSSKQTALKRLLDPSESWERTPAKLVAPNSEIIVLADKDAYPSF
Sequences:
>Translated_238_residues MTKYEIQVSEDKSSLALAASDLITQIIESTLKNKTRAKISLCGGSTPKAAYSLLGKKNIDWMNVDLFLGDERWVDNKSQE SNCFLLNNSLFKEGNPSLEASFFAVSTVELSSPDESADVYETILKNNFAGDPPRFDLILLGLGDDGHTASLFPGSEALFE RDSLITAGEGKGHKRITFTSKLLSAADNVVFLISGSSKQTALKRLLDPSESWERTPAKLVAPNSEIIVLADKDAYPSF >Mature_237_residues TKYEIQVSEDKSSLALAASDLITQIIESTLKNKTRAKISLCGGSTPKAAYSLLGKKNIDWMNVDLFLGDERWVDNKSQES NCFLLNNSLFKEGNPSLEASFFAVSTVELSSPDESADVYETILKNNFAGDPPRFDLILLGLGDDGHTASLFPGSEALFER DSLITAGEGKGHKRITFTSKLLSAADNVVFLISGSSKQTALKRLLDPSESWERTPAKLVAPNSEIIVLADKDAYPSF
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI6912586, Length=233, Percent_Identity=31.3304721030043, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI52145310, Length=239, Percent_Identity=27.6150627615063, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533060, Length=254, Percent_Identity=30.7086614173228, Blast_Score=91, Evalue=4e-19, Organism=Caenorhabditis elegans, GI115533058, Length=254, Percent_Identity=30.7086614173228, Blast_Score=91, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324362, Length=188, Percent_Identity=32.9787234042553, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319918, Length=190, Percent_Identity=30.5263157894737, Blast_Score=81, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6321687, Length=224, Percent_Identity=31.25, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6321957, Length=217, Percent_Identity=27.6497695852535, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24641119, Length=203, Percent_Identity=29.064039408867, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25931; Mature: 25800
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYEIQVSEDKSSLALAASDLITQIIESTLKNKTRAKISLCGGSTPKAAYSLLGKKNID CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCC WMNVDLFLGDERWVDNKSQESNCFLLNNSLFKEGNPSLEASFFAVSTVELSSPDESADVY EEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHH ETILKNNFAGDPPRFDLILLGLGDDGHTASLFPGSEALFERDSLITAGEGKGHKRITFTS HHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHCCCCEEEECCCCCCEEEEEHH KLLSAADNVVFLISGSSKQTALKRLLDPSESWERTPAKLVAPNSEIIVLADKDAYPSF HHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHCCCCCEEECCCCCEEEEECCCCCCCC >Mature Secondary Structure TKYEIQVSEDKSSLALAASDLITQIIESTLKNKTRAKISLCGGSTPKAAYSLLGKKNID CEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCC WMNVDLFLGDERWVDNKSQESNCFLLNNSLFKEGNPSLEASFFAVSTVELSSPDESADVY EEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCHHHHH ETILKNNFAGDPPRFDLILLGLGDDGHTASLFPGSEALFERDSLITAGEGKGHKRITFTS HHHHHCCCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHCCCCEEEECCCCCCEEEEEHH KLLSAADNVVFLISGSSKQTALKRLLDPSESWERTPAKLVAPNSEIIVLADKDAYPSF HHHHCCCCEEEEEECCCHHHHHHHHCCCCCHHCCCCCEEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]