| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025518
Identifier: 124025518
GI number: 124025518
Start: 747965
End: 748360
Strand: Direct
Name: 124025518
Synonym: NATL1_08111
Alternate gene names: NA
Gene position: 747965-748360 (Clockwise)
Preceding gene: 124025517
Following gene: 124025522
Centisome position: 40.11
GC content: 34.85
Gene sequence:
>396_bases GTGCATACCTCTGACTCAAAAGACAGCTTGATAGCTGAAGTAGCCAAGGCTGCAGATCTTTGTATGAAGCCCTATGTGCA TTCTGTCTTTTTAGAAAATCAATTATTTGATAATAATGATTTTGATGACTTGATGTTTAAAATTCAATGTAGAAATATAG ACGGAGAAAGAGAAGAATCTATGGATATTGAACTTGAAGTTTATAAAAGTGGAAATGAGATAAATATGACTATCTCTTGG AAATCTTTAATTGATAATCCAATATTGTGGCAAGGGAAGCATGCTGTTTGGATGGATAGCTCTTCGGGTGTGAAATGCGA AAAGCCTTCATATGGAAATCATTTTGAGTCCCTTGCAAGAAGACTAAGGACGTTTTTTAAGACTTCATTGTCCTGA
Upstream 100 bases:
>100_bases GTCAACAGGTTTCAATTGCTTTATTCGAAATTCGGACAACCCGGCAAAATAAATTCAGGTTTTTCCCCTGGCCCTATTAA AGTATTCATTAAGTCAATAA
Downstream 100 bases:
>100_bases GTTATATTTGATCAGTTGTCGCTCCTTGGCTTGATGAACTTACTAATCTGGAATACTTCCCAAGAATGCCTGTCTTATAT CTAGGCTTTGGCTTCTCCCA
Product: putative coat protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MHTSDSKDSLIAEVAKAADLCMKPYVHSVFLENQLFDNNDFDDLMFKIQCRNIDGEREESMDIELEVYKSGNEINMTISW KSLIDNPILWQGKHAVWMDSSSGVKCEKPSYGNHFESLARRLRTFFKTSLS
Sequences:
>Translated_131_residues MHTSDSKDSLIAEVAKAADLCMKPYVHSVFLENQLFDNNDFDDLMFKIQCRNIDGEREESMDIELEVYKSGNEINMTISW KSLIDNPILWQGKHAVWMDSSSGVKCEKPSYGNHFESLARRLRTFFKTSLS >Mature_131_residues MHTSDSKDSLIAEVAKAADLCMKPYVHSVFLENQLFDNNDFDDLMFKIQCRNIDGEREESMDIELEVYKSGNEINMTISW KSLIDNPILWQGKHAVWMDSSSGVKCEKPSYGNHFESLARRLRTFFKTSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15117; Mature: 15117
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTSDSKDSLIAEVAKAADLCMKPYVHSVFLENQLFDNNDFDDLMFKIQCRNIDGEREES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC MDIELEVYKSGNEINMTISWKSLIDNPILWQGKHAVWMDSSSGVKCEKPSYGNHFESLAR CCEEEEEEECCCEEEEEEEHHHHHCCCCEECCCEEEEEECCCCCEECCCCCCCHHHHHHH RLRTFFKTSLS HHHHHHHHCCC >Mature Secondary Structure MHTSDSKDSLIAEVAKAADLCMKPYVHSVFLENQLFDNNDFDDLMFKIQCRNIDGEREES CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCC MDIELEVYKSGNEINMTISWKSLIDNPILWQGKHAVWMDSSSGVKCEKPSYGNHFESLAR CCEEEEEEECCCEEEEEEEHHHHHCCCCEECCCEEEEEECCCCCEECCCCCCCHHHHHHH RLRTFFKTSLS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA