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The map label for this gene is ddpX [H]

Identifier: 124025500

GI number: 124025500

Start: 725932

End: 726687

Strand: Direct

Name: ddpX [H]

Synonym: NATL1_07931

Alternate gene names: 124025500

Gene position: 725932-726687 (Clockwise)

Preceding gene: 124025499

Following gene: 124025502

Centisome position: 38.93

GC content: 36.24

Gene sequence:

>756_bases
ATGAATTTAAGACCTTGGAATAATATAAAAATAAATGAATGTAATGAGCCTTTAATTGTTATCCCTGAATCCATATTTCG
ACTAACACCTCATCCTTATATGTCGTTAGGTGCACCATATTTAACTGGACTAGATCCGTGGTTTTTACGCCAAAGTGTCT
TAAAAAGATTGAAACAAGCACAACAAAATCTTTTTGATATTACTTCCGATTTACAGTTGGCTTTGTTTGATGCTTGGAGA
CCTATCTCTGTACAGAAATTCATGTTTAATTACACTATTGAAGAAACTTGTAGGTCGAGGGGGATAAATATTGATGATAT
CTCAAATAAAGAAGATATCACTGACGTGATTGAGGAGGTTGGTCGATTCTGGGCAAAACCTTCATGTAATCCTCTTACAC
CTCCTCCTCATAGTACTGGTGCTGCAATAGATTTGACTCTTGCTGATATGACTGGACATCAATTGGATCTTGGAGGAGAA
ATAGATTTTATTGGTCCTGAATCAAGTCCTGACTTTTATCAGAAAGACAATTTAGGGATGCCTTGTTCAAAACATCAAGT
TTTTCATAACAGAAGATCTCTTTTATCTTCAGTTATGGAACAGGCTGGATTTGTTCAACACCCAAACGAGTGGTGGCATT
TTAGCTATGGAGATCAATTATGGGCTTGGACTAGCAATCAAGGTATTCCTATTTATGGAGCTGCACTTGAAGTAAGTAAA
GACATTACACTTTCAGAACCAAGTTTAGTCACATGA

Upstream 100 bases:

>100_bases
TTTGATGAGTCATTACTATTGAACTCATTCTTTTTGAAGGTAAGCTTAAGGAAAGAATTTTTGTGCGAATGAATTTTTAC
CCTAATATTTTATACAAATC

Downstream 100 bases:

>100_bases
TCCCCAAGACTTGATGAGGCTCCCGTATCTTTCCAGCTAAGGAATAAAGGCTCTAATGTCTTCTCTAAGTCATCGATAGG
CATTTTTTGTAGATATGGAG

Product: D-ala-D-ala dipeptidase

Products: NA

Alternate protein names: D-Ala-D-Ala dipeptidase [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNLRPWNNIKINECNEPLIVIPESIFRLTPHPYMSLGAPYLTGLDPWFLRQSVLKRLKQAQQNLFDITSDLQLALFDAWR
PISVQKFMFNYTIEETCRSRGINIDDISNKEDITDVIEEVGRFWAKPSCNPLTPPPHSTGAAIDLTLADMTGHQLDLGGE
IDFIGPESSPDFYQKDNLGMPCSKHQVFHNRRSLLSSVMEQAGFVQHPNEWWHFSYGDQLWAWTSNQGIPIYGAALEVSK
DITLSEPSLVT

Sequences:

>Translated_251_residues
MNLRPWNNIKINECNEPLIVIPESIFRLTPHPYMSLGAPYLTGLDPWFLRQSVLKRLKQAQQNLFDITSDLQLALFDAWR
PISVQKFMFNYTIEETCRSRGINIDDISNKEDITDVIEEVGRFWAKPSCNPLTPPPHSTGAAIDLTLADMTGHQLDLGGE
IDFIGPESSPDFYQKDNLGMPCSKHQVFHNRRSLLSSVMEQAGFVQHPNEWWHFSYGDQLWAWTSNQGIPIYGAALEVSK
DITLSEPSLVT
>Mature_251_residues
MNLRPWNNIKINECNEPLIVIPESIFRLTPHPYMSLGAPYLTGLDPWFLRQSVLKRLKQAQQNLFDITSDLQLALFDAWR
PISVQKFMFNYTIEETCRSRGINIDDISNKEDITDVIEEVGRFWAKPSCNPLTPPPHSTGAAIDLTLADMTGHQLDLGGE
IDFIGPESSPDFYQKDNLGMPCSKHQVFHNRRSLLSSVMEQAGFVQHPNEWWHFSYGDQLWAWTSNQGIPIYGAALEVSK
DITLSEPSLVT

Specific function: Hydrolyzes D-Ala-D-Ala. May have a role in cell-wall turnover [H]

COG id: COG2173

COG function: function code M; D-alanyl-D-alanine dipeptidase

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M15D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009045
- InterPro:   IPR000755 [H]

Pfam domain/function: PF01427 Peptidase_M15 [H]

EC number: =3.4.13.22 [H]

Molecular weight: Translated: 28564; Mature: 28564

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPWNNIKINECNEPLIVIPESIFRLTPHPYMSLGAPYLTGLDPWFLRQSVLKRLKQA
CCCCCCCCEEEECCCCCEEEECHHHHHCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHH
QQNLFDITSDLQLALFDAWRPISVQKFMFNYTIEETCRSRGINIDDISNKEDITDVIEEV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GRFWAKPSCNPLTPPPHSTGAAIDLTLADMTGHQLDLGGEIDFIGPESSPDFYQKDNLGM
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCC
PCSKHQVFHNRRSLLSSVMEQAGFVQHPNEWWHFSYGDQLWAWTSNQGIPIYGAALEVSK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEEECC
DITLSEPSLVT
CCEECCCCCCC
>Mature Secondary Structure
MNLRPWNNIKINECNEPLIVIPESIFRLTPHPYMSLGAPYLTGLDPWFLRQSVLKRLKQA
CCCCCCCCEEEECCCCCEEEECHHHHHCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHH
QQNLFDITSDLQLALFDAWRPISVQKFMFNYTIEETCRSRGINIDDISNKEDITDVIEEV
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH
GRFWAKPSCNPLTPPPHSTGAAIDLTLADMTGHQLDLGGEIDFIGPESSPDFYQKDNLGM
HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCCCCC
PCSKHQVFHNRRSLLSSVMEQAGFVQHPNEWWHFSYGDQLWAWTSNQGIPIYGAALEVSK
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEEEECC
DITLSEPSLVT
CCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9751644 [H]