| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025355
Identifier: 124025355
GI number: 124025355
Start: 585435
End: 585974
Strand: Reverse
Name: 124025355
Synonym: NATL1_06441
Alternate gene names: NA
Gene position: 585974-585435 (Counterclockwise)
Preceding gene: 124025360
Following gene: 124025354
Centisome position: 31.42
GC content: 36.85
Gene sequence:
>540_bases ATGTCTATGATTGAAGTTATCCAAGATGTTACAAAATGGCTAGCCTGGGGGGGGGCAGGACTGGGGGTATTGACTATTTT GGCTTATTTATTTAACTGGGGAATTAAATTCCGACTAACTGGGACGACAATTTTCACACTTTTATTATCTGCTAGTTGCT GGGCCTTTGAGCAAAGCTATACTCCTCCCTTTAATGTTGAGGGCTACAAATATGCTCCTATTGTTTACGACAATGGATTT GATTTAGTTGTTGCACAAGCATCTAATGATTTCCCTAAAGAAGCAATAAAACCAACATTGTTACAAATAGCCGGAAATTT GAAAGGGGGAGGAAGAAATGGCGCTCAGGTCAAAGTCAGGCTCAGAAGAATAGAATCCGCTGGTGATGGAATAAGTAAAC CAATTATTCTAGGTGAATTAATAAATGATTTAAAAGAATCAAAGATAATAGAATTACCAGACAGGAATTATTCTGCAAGT GAATATTTATCAAATGATGCTGATATTGAAGAAATTCCCTCATTAGAGACTGATGAGTAA
Upstream 100 bases:
>100_bases CTTTAATCTTTTAGAGCTCCACTCATCTCCCATGAAACATTATTCTCAAACTTGGGGGAGCTAACAAACTATAAAGAATC AATTCAGGAGAAACCAGCCT
Downstream 100 bases:
>100_bases TAAGTCATTATTGAAAGATCTTCCTAAAAGCTTTTATCAAGAAGAAAAAATACTCATATCAAATAATATAAAAACATGGG ATTCTTTATTATCTATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSMIEVIQDVTKWLAWGGAGLGVLTILAYLFNWGIKFRLTGTTIFTLLLSASCWAFEQSYTPPFNVEGYKYAPIVYDNGF DLVVAQASNDFPKEAIKPTLLQIAGNLKGGGRNGAQVKVRLRRIESAGDGISKPIILGELINDLKESKIIELPDRNYSAS EYLSNDADIEEIPSLETDE
Sequences:
>Translated_179_residues MSMIEVIQDVTKWLAWGGAGLGVLTILAYLFNWGIKFRLTGTTIFTLLLSASCWAFEQSYTPPFNVEGYKYAPIVYDNGF DLVVAQASNDFPKEAIKPTLLQIAGNLKGGGRNGAQVKVRLRRIESAGDGISKPIILGELINDLKESKIIELPDRNYSAS EYLSNDADIEEIPSLETDE >Mature_178_residues SMIEVIQDVTKWLAWGGAGLGVLTILAYLFNWGIKFRLTGTTIFTLLLSASCWAFEQSYTPPFNVEGYKYAPIVYDNGFD LVVAQASNDFPKEAIKPTLLQIAGNLKGGGRNGAQVKVRLRRIESAGDGISKPIILGELINDLKESKIIELPDRNYSASE YLSNDADIEEIPSLETDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19736; Mature: 19605
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMIEVIQDVTKWLAWGGAGLGVLTILAYLFNWGIKFRLTGTTIFTLLLSASCWAFEQSY CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCC TPPFNVEGYKYAPIVYDNGFDLVVAQASNDFPKEAIKPTLLQIAGNLKGGGRNGAQVKVR CCCCCCCCEEECCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHH LRRIESAGDGISKPIILGELINDLKESKIIELPDRNYSASEYLSNDADIEEIPSLETDE EEHHHHCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure SMIEVIQDVTKWLAWGGAGLGVLTILAYLFNWGIKFRLTGTTIFTLLLSASCWAFEQSY CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCC TPPFNVEGYKYAPIVYDNGFDLVVAQASNDFPKEAIKPTLLQIAGNLKGGGRNGAQVKVR CCCCCCCCEEECCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHH LRRIESAGDGISKPIILGELINDLKESKIIELPDRNYSASEYLSNDADIEEIPSLETDE EEHHHHCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA