| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025354
Identifier: 124025354
GI number: 124025354
Start: 585026
End: 585442
Strand: Reverse
Name: 124025354
Synonym: NATL1_06431
Alternate gene names: NA
Gene position: 585442-585026 (Counterclockwise)
Preceding gene: 124025355
Following gene: 124025353
Centisome position: 31.4
GC content: 30.22
Gene sequence:
>417_bases ATGAGTAATAAGTCATTATTGAAAGATCTTCCTAAAAGCTTTTATCAAGAAGAAAAAATACTCATATCAAATAATATAAA AACATGGGATTCTTTATTATCTATTAGTGATGAAGAAATAAATAATCTAATCTATGGAAGCTTGGGAAGTGTTCGCAATC TAAAAAGACTTAAATGCATAGCATATTTTATATGTACTTTAGATATTCAACTTAGCGAAGCTGCCTTATTGATGCACTCA GGGTTAATTTCTAATAAGGCCATTTCACGACTTACGCCTCAAGAGCTAGTTCAAAAGACTGGGCGCTTTGAAAGAACTCT ACGAACAGGAAGAATTCCAATAATAGATCTAAAAAAAGCTCATTTTTTAATAGAGAAAGCAAAAAAAAATTTATTTAATG TACCCAAGTGCCATTAG
Upstream 100 bases:
>100_bases AAAGAATCAAAGATAATAGAATTACCAGACAGGAATTATTCTGCAAGTGAATATTTATCAAATGATGCTGATATTGAAGA AATTCCCTCATTAGAGACTG
Downstream 100 bases:
>100_bases GTAATAGAATATAATTAATCCATAGAAACTTGGTAAACTAATTGAAATGAATGGTTTACTAATCACTTTAATATTTGCAT CATTTGGAATCAATCAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSNKSLLKDLPKSFYQEEKILISNNIKTWDSLLSISDEEINNLIYGSLGSVRNLKRLKCIAYFICTLDIQLSEAALLMHS GLISNKAISRLTPQELVQKTGRFERTLRTGRIPIIDLKKAHFLIEKAKKNLFNVPKCH
Sequences:
>Translated_138_residues MSNKSLLKDLPKSFYQEEKILISNNIKTWDSLLSISDEEINNLIYGSLGSVRNLKRLKCIAYFICTLDIQLSEAALLMHS GLISNKAISRLTPQELVQKTGRFERTLRTGRIPIIDLKKAHFLIEKAKKNLFNVPKCH >Mature_137_residues SNKSLLKDLPKSFYQEEKILISNNIKTWDSLLSISDEEINNLIYGSLGSVRNLKRLKCIAYFICTLDIQLSEAALLMHSG LISNKAISRLTPQELVQKTGRFERTLRTGRIPIIDLKKAHFLIEKAKKNLFNVPKCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15787; Mature: 15656
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKSLLKDLPKSFYQEEKILISNNIKTWDSLLSISDEEINNLIYGSLGSVRNLKRLKCI CCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH AYFICTLDIQLSEAALLMHSGLISNKAISRLTPQELVQKTGRFERTLRTGRIPIIDLKKA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHH HFLIEKAKKNLFNVPKCH HHHHHHHHHHHCCCCCCC >Mature Secondary Structure SNKSLLKDLPKSFYQEEKILISNNIKTWDSLLSISDEEINNLIYGSLGSVRNLKRLKCI CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH AYFICTLDIQLSEAALLMHSGLISNKAISRLTPQELVQKTGRFERTLRTGRIPIIDLKKA HHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHH HFLIEKAKKNLFNVPKCH HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA