| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025300
Identifier: 124025300
GI number: 124025300
Start: 535445
End: 536485
Strand: Direct
Name: 124025300
Synonym: NATL1_05891
Alternate gene names: NA
Gene position: 535445-536485 (Clockwise)
Preceding gene: 124025299
Following gene: 124025301
Centisome position: 28.71
GC content: 39.48
Gene sequence:
>1041_bases ATGTTTGGTCTAATTGGACATTCAACAAGTTTTGAAGATGCCAAGCGAAAGGCATTAGGCTTGGGGTATGACCATATCGC TGAAGGGGATTTGGACGTGTGGTGTACTGCTCCTCCTCAGTTGGTTGAGAATGTGAAAGTTGTGAGTGCGATCGGAAAGA CTATTGAGGGAGCATATATAGACTCATGCTTTGTTCCAGAGATGCTAAGTCGCTTCAAAACTGCAAGAAGAAAGGTTTTG AATGCAATGGAATTGGCGCAAAAGAAAGGGATCAGTATCACTGCTCTAGGTGGCTTTACATCAATAATTTTTGAGAATTT TAATTTGCTCCAAAATCAACAAGTTAGAAATACGACTCTTGATTGGCAAAGGTTTACCACTGGTAATACTCATACAGCTT GGGTGATATGTAGACAGTTAGAGCAAAATGCACCTCGAATAGGAATTGATTTGAGTAAATCAAAAGTAGCTGTTGTTGGC GCTACTGGTGATATTGGCAGCGCTGTTTGTAGGTGGCTTTCCAATCGAACTGGTGTTTCTGAACTCCTTTTAGTAGCCAG GCAGCAAAAGCCTTTACTTGAACTTCAATCTCAACTTGGAGGAGGAAGAATTCTTAGTCTTGATGATGCTTTACCAGAAG CAGATATTGTTATTTGGGTTGCAAGCATGCCTAAAACCTTAGAAATCGACCCATCTAAAATTAAAAGACCTTGTTTAATG ATTGATGGTGGATACCCTAAAAATTTGGGCGAGAAGTTTTCAGGACCTGGAATACACGTTTTAAAAGGAGGAATAGTTCA ATTTTTCAAAGATATTGGTTGGAGCATGATGGAATTGGCTGAGATGGAAAATCCTAAAAGAGAAATGTTTGCTTGTTTTG CTGAAGCAATGCTTCTTGAATTCGAGAATTGTCATACCAACTTCAGTTGGGGAAGAAATAATATAACGTTGGAAAAGATG GATTTCATCGGTAAGGCTTCTGAAAGGCACGGGTTTTCGGCTGTTGGTTTGAAATCAAATATTCAGACATTAACCGTCTG A
Upstream 100 bases:
>100_bases CTTAAAGTTCTTGAGGAATTCTTTTTTTTGTGACCGTGGTGGTCTAACCTTCAAACTTGGATAAATATTTAGTTTCAATT TTGATCTTGCTTGGTGCCAA
Downstream 100 bases:
>100_bases ACATTTGGTTACTTTTATTTATGGCTAGACGTTTTCTCCTCGAATTTGAAAAACCTCTTGTTGAATTAGAGAATCAGATT GATCAAATCAGAGAATTAGC
Product: dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; Dehydrogenase-Like Protein; Acyl-ACP Reductase; Dehydrogenase-Like; Aminotransferase Class-III; Dehydrogenase Like; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MFGLIGHSTSFEDAKRKALGLGYDHIAEGDLDVWCTAPPQLVENVKVVSAIGKTIEGAYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGISITALGGFTSIIFENFNLLQNQQVRNTTLDWQRFTTGNTHTAWVICRQLEQNAPRIGIDLSKSKVAVVG ATGDIGSAVCRWLSNRTGVSELLLVARQQKPLLELQSQLGGGRILSLDDALPEADIVIWVASMPKTLEIDPSKIKRPCLM IDGGYPKNLGEKFSGPGIHVLKGGIVQFFKDIGWSMMELAEMENPKREMFACFAEAMLLEFENCHTNFSWGRNNITLEKM DFIGKASERHGFSAVGLKSNIQTLTV
Sequences:
>Translated_346_residues MFGLIGHSTSFEDAKRKALGLGYDHIAEGDLDVWCTAPPQLVENVKVVSAIGKTIEGAYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGISITALGGFTSIIFENFNLLQNQQVRNTTLDWQRFTTGNTHTAWVICRQLEQNAPRIGIDLSKSKVAVVG ATGDIGSAVCRWLSNRTGVSELLLVARQQKPLLELQSQLGGGRILSLDDALPEADIVIWVASMPKTLEIDPSKIKRPCLM IDGGYPKNLGEKFSGPGIHVLKGGIVQFFKDIGWSMMELAEMENPKREMFACFAEAMLLEFENCHTNFSWGRNNITLEKM DFIGKASERHGFSAVGLKSNIQTLTV >Mature_346_residues MFGLIGHSTSFEDAKRKALGLGYDHIAEGDLDVWCTAPPQLVENVKVVSAIGKTIEGAYIDSCFVPEMLSRFKTARRKVL NAMELAQKKGISITALGGFTSIIFENFNLLQNQQVRNTTLDWQRFTTGNTHTAWVICRQLEQNAPRIGIDLSKSKVAVVG ATGDIGSAVCRWLSNRTGVSELLLVARQQKPLLELQSQLGGGRILSLDDALPEADIVIWVASMPKTLEIDPSKIKRPCLM IDGGYPKNLGEKFSGPGIHVLKGGIVQFFKDIGWSMMELAEMENPKREMFACFAEAMLLEFENCHTNFSWGRNNITLEKM DFIGKASERHGFSAVGLKSNIQTLTV
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38226; Mature: 38226
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLIGHSTSFEDAKRKALGLGYDHIAEGDLDVWCTAPPQLVENVKVVSAIGKTIEGAYI CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHH DSCFVPEMLSRFKTARRKVLNAMELAQKKGISITALGGFTSIIFENFNLLQNQQVRNTTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCHHCCCC DWQRFTTGNTHTAWVICRQLEQNAPRIGIDLSKSKVAVVGATGDIGSAVCRWLSNRTGVS CHHEECCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCHH ELLLVARQQKPLLELQSQLGGGRILSLDDALPEADIVIWVASMPKTLEIDPSKIKRPCLM HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEECCHHHHCCCEEE IDGGYPKNLGEKFSGPGIHVLKGGIVQFFKDIGWSMMELAEMENPKREMFACFAEAMLLE EECCCCCCHHHHCCCCCEEEHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHH FENCHTNFSWGRNNITLEKMDFIGKASERHGFSAVGLKSNIQTLTV HHHCCCCCCCCCCCEEEEHHHHHHCCCCCCCCEEECCCCCCEEECC >Mature Secondary Structure MFGLIGHSTSFEDAKRKALGLGYDHIAEGDLDVWCTAPPQLVENVKVVSAIGKTIEGAYI CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHH DSCFVPEMLSRFKTARRKVLNAMELAQKKGISITALGGFTSIIFENFNLLQNQQVRNTTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHCCCCHHCCCC DWQRFTTGNTHTAWVICRQLEQNAPRIGIDLSKSKVAVVGATGDIGSAVCRWLSNRTGVS CHHEECCCCCCHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCHH ELLLVARQQKPLLELQSQLGGGRILSLDDALPEADIVIWVASMPKTLEIDPSKIKRPCLM HHHHHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCEEECCHHHHCCCEEE IDGGYPKNLGEKFSGPGIHVLKGGIVQFFKDIGWSMMELAEMENPKREMFACFAEAMLLE EECCCCCCHHHHCCCCCEEEHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHH FENCHTNFSWGRNNITLEKMDFIGKASERHGFSAVGLKSNIQTLTV HHHCCCCCCCCCCCEEEEHHHHHHCCCCCCCCEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA