| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124025299
Identifier: 124025299
GI number: 124025299
Start: 534573
End: 535298
Strand: Direct
Name: 124025299
Synonym: NATL1_05881
Alternate gene names: NA
Gene position: 534573-535298 (Clockwise)
Preceding gene: 124025298
Following gene: 124025300
Centisome position: 28.67
GC content: 37.33
Gene sequence:
>726_bases ATGCAAGCTTTTGCATCCAACAATTTAACCGTAGAAAAAGAAGAACTAAGTTCTGACTCTCTTCCAGATTTCACCTCAGA ATCTTACAAAGATGCTTACAGCAGAATTAATGCAGTTGTAATTGAAGGAGAGCAAGAGGCTTATTCCAATTTTCTTGATC TCGCTAAGTTGATTCCTGAACATGCAGATGAGCTTGTGAGGCTGGGGAAGATGGAGAAAAAACATATGAATGGTTTTTGT GCTTGCGGGAGAAATCTTGCTGTAAAGCCTGATATGCCTTTTGCGAAGACCTTTTTCTCAAAACTCCATAATAATTTTTT AGAGGCTTTCAAAGTAGGAGATACAACTACCTGTCTTCTAATTCAATGTATCCTGATTGAATCTTTTGCAATATCTGCAT ATCACGTTTATATACGTGTTGCTGATCCATTCGCCAAAAGAATCACAGAGGGTGTTGTCCAAGATGAATACTTGCATTTG AACTATGGTCAAGAATGGCTTAAGGCAAATCTAGAGACAGTTAAGAAAGATCTTATGAGGGCTAATAAGGAAAACTTGCC TCTTATAAAGTCCATGCTCGATGAAGTTTCAAACGACGCGGAAGTTCTTCATATGGATAAAGAAGAATTAATGGAGGAAT TTATGATTGCTTATCAAGATTCCCTTCTTGAAATAGGTCTTGATAATAGAGAAATTGCAAGAATGGCTCTTGCAGCGGTG ATCTAA
Upstream 100 bases:
>100_bases CAGAAAGGCCTGTTTCTAGCAGTTAAGATGTGGTAACTGAACTACCGTTTTGTATTTAATTCTGTAAGATCACTCAGATT GACAAATTTCTAATAGATCT
Downstream 100 bases:
>100_bases GGATTTAAAATTTACATATTTTGCATCTTTCTCTATTCCTCAAGAACTTAAAGTTCTTGAGGAATTCTTTTTTTTGTGAC CGTGGTGGTCTAACCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MQAFASNNLTVEKEELSSDSLPDFTSESYKDAYSRINAVVIEGEQEAYSNFLDLAKLIPEHADELVRLGKMEKKHMNGFC ACGRNLAVKPDMPFAKTFFSKLHNNFLEAFKVGDTTTCLLIQCILIESFAISAYHVYIRVADPFAKRITEGVVQDEYLHL NYGQEWLKANLETVKKDLMRANKENLPLIKSMLDEVSNDAEVLHMDKEELMEEFMIAYQDSLLEIGLDNREIARMALAAV I
Sequences:
>Translated_241_residues MQAFASNNLTVEKEELSSDSLPDFTSESYKDAYSRINAVVIEGEQEAYSNFLDLAKLIPEHADELVRLGKMEKKHMNGFC ACGRNLAVKPDMPFAKTFFSKLHNNFLEAFKVGDTTTCLLIQCILIESFAISAYHVYIRVADPFAKRITEGVVQDEYLHL NYGQEWLKANLETVKKDLMRANKENLPLIKSMLDEVSNDAEVLHMDKEELMEEFMIAYQDSLLEIGLDNREIARMALAAV I >Mature_241_residues MQAFASNNLTVEKEELSSDSLPDFTSESYKDAYSRINAVVIEGEQEAYSNFLDLAKLIPEHADELVRLGKMEKKHMNGFC ACGRNLAVKPDMPFAKTFFSKLHNNFLEAFKVGDTTTCLLIQCILIESFAISAYHVYIRVADPFAKRITEGVVQDEYLHL NYGQEWLKANLETVKKDLMRANKENLPLIKSMLDEVSNDAEVLHMDKEELMEEFMIAYQDSLLEIGLDNREIARMALAAV I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27415; Mature: 27415
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFASNNLTVEKEELSSDSLPDFTSESYKDAYSRINAVVIEGEQEAYSNFLDLAKLIPE CCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHH HADELVRLGKMEKKHMNGFCACGRNLAVKPDMPFAKTFFSKLHNNFLEAFKVGDTTTCLL HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH IQCILIESFAISAYHVYIRVADPFAKRITEGVVQDEYLHLNYGQEWLKANLETVKKDLMR HHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH ANKENLPLIKSMLDEVSNDAEVLHMDKEELMEEFMIAYQDSLLEIGLDNREIARMALAAV CCCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH I C >Mature Secondary Structure MQAFASNNLTVEKEELSSDSLPDFTSESYKDAYSRINAVVIEGEQEAYSNFLDLAKLIPE CCCCCCCCCEEEHHHCCCCCCCCCCHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHH HADELVRLGKMEKKHMNGFCACGRNLAVKPDMPFAKTFFSKLHNNFLEAFKVGDTTTCLL HHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH IQCILIESFAISAYHVYIRVADPFAKRITEGVVQDEYLHLNYGQEWLKANLETVKKDLMR HHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHH ANKENLPLIKSMLDEVSNDAEVLHMDKEELMEEFMIAYQDSLLEIGLDNREIARMALAAV CCCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA