The gene/protein map for NC_008819 is currently unavailable.
Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124025285

Identifier: 124025285

GI number: 124025285

Start: 519738

End: 520202

Strand: Direct

Name: 124025285

Synonym: NATL1_05741

Alternate gene names: NA

Gene position: 519738-520202 (Clockwise)

Preceding gene: 124025284

Following gene: 124025286

Centisome position: 27.87

GC content: 33.12

Gene sequence:

>465_bases
TTGATTAGTCGCACTCAATATATACAAAAAGTAGGCCAATTTCAAAAAAAGAAGTTGTCCAAGGAATTGTTATACAGTGT
TTTTTCCTCAAAACAGGTTCAAAGAAAATTTCCAATTCAAGCAGCTCTTCATCTCGTTTTAGATGGTGCATTAGTAGGCA
TACTCATGACTGTGGCGATAATGTCATCCGTAGCTCTGCATTCTCAATATTTGTGGACTAAGTCTTTTACTAAACTTGAA
ACTACTAGAGACTTGAACCGAAGGACATTGGAGTCAACATCAATCCTTGAAAGTTATCTATTGAAAAATCAAAAGTTGTC
TAGAAATTTAGTTTCCACTAAAGCGGAAGATCTTATATATGTAGATAGACCAAAACCAGAAGATACTAAAAAATTATTCG
ATGTGACATTGAAAAGTAGATTTCTAGAGAAAATATCTTCTTTTCCCGTTAAATCAGGTTACTAA

Upstream 100 bases:

>100_bases
ACTATTAGTAGCTTGAGATTAAATAAAAAAAATATCAGTATACCAGCTCTTGCAGTTGCTTGATCAAGGTGTTTGACTTG
AATTACTTTCGAATTTTGAT

Downstream 100 bases:

>100_bases
TAATTCCCATGAGAAGTTCTGATCATAGAAAGAAAAGAAAGACTTTTAAAGTAAACACTCTTCAGCCCCTATCTCAGTCC
AGATTTAGAATTATCTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE
TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY

Sequences:

>Translated_154_residues
MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE
TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY
>Mature_154_residues
MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE
TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17736; Mature: 17736

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MSSVALHSQYLWTKSFTKLETTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
VDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MSSVALHSQYLWTKSFTKLETTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
VDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA