Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025285
Identifier: 124025285
GI number: 124025285
Start: 519738
End: 520202
Strand: Direct
Name: 124025285
Synonym: NATL1_05741
Alternate gene names: NA
Gene position: 519738-520202 (Clockwise)
Preceding gene: 124025284
Following gene: 124025286
Centisome position: 27.87
GC content: 33.12
Gene sequence:
>465_bases TTGATTAGTCGCACTCAATATATACAAAAAGTAGGCCAATTTCAAAAAAAGAAGTTGTCCAAGGAATTGTTATACAGTGT TTTTTCCTCAAAACAGGTTCAAAGAAAATTTCCAATTCAAGCAGCTCTTCATCTCGTTTTAGATGGTGCATTAGTAGGCA TACTCATGACTGTGGCGATAATGTCATCCGTAGCTCTGCATTCTCAATATTTGTGGACTAAGTCTTTTACTAAACTTGAA ACTACTAGAGACTTGAACCGAAGGACATTGGAGTCAACATCAATCCTTGAAAGTTATCTATTGAAAAATCAAAAGTTGTC TAGAAATTTAGTTTCCACTAAAGCGGAAGATCTTATATATGTAGATAGACCAAAACCAGAAGATACTAAAAAATTATTCG ATGTGACATTGAAAAGTAGATTTCTAGAGAAAATATCTTCTTTTCCCGTTAAATCAGGTTACTAA
Upstream 100 bases:
>100_bases ACTATTAGTAGCTTGAGATTAAATAAAAAAAATATCAGTATACCAGCTCTTGCAGTTGCTTGATCAAGGTGTTTGACTTG AATTACTTTCGAATTTTGAT
Downstream 100 bases:
>100_bases TAATTCCCATGAGAAGTTCTGATCATAGAAAGAAAAGAAAGACTTTTAAAGTAAACACTCTTCAGCCCCTATCTCAGTCC AGATTTAGAATTATCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY
Sequences:
>Translated_154_residues MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY >Mature_154_residues MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAIMSSVALHSQYLWTKSFTKLE TTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIYVDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17736; Mature: 17736
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MSSVALHSQYLWTKSFTKLETTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE VDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MISRTQYIQKVGQFQKKKLSKELLYSVFSSKQVQRKFPIQAALHLVLDGALVGILMTVAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH MSSVALHSQYLWTKSFTKLETTRDLNRRTLESTSILESYLLKNQKLSRNLVSTKAEDLIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE VDRPKPEDTKKLFDVTLKSRFLEKISSFPVKSGY ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA