Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025284
Identifier: 124025284
GI number: 124025284
Start: 518307
End: 519653
Strand: Direct
Name: 124025284
Synonym: NATL1_05731
Alternate gene names: NA
Gene position: 518307-519653 (Clockwise)
Preceding gene: 124025282
Following gene: 124025285
Centisome position: 27.8
GC content: 34.3
Gene sequence:
>1347_bases ATGAGACAAGCAAAAACTGGTTGGAAATGGGCGATCGCTCTATTTTCATTGCTTTTAACTGTTCTGATATGGCAACAAGG TTTGCAAGAAAGCTTTGAACGTCCCTCAGTAGCTCCAAAGATTTCTTTGATGCAAACTGAGATGGCAGTTTCAGCTTCTT CATCGTTACCTGAAACAATACAAGAAGTATTTTTAGGTTCAGAACCTCAAGAAAAACTTTATCAAGCTCTCAGTGACATT CCTTTGGGACAAATTGAGGATAGAGAAAGATTGTTATTAGCAATTCTCGAAGAGTCTGAGAATGAGCAAAAATTTATCTT GAAGGAAGGTTTTAGTGATAAGAATTTTGAAACAGTTAAAGGCTATATATTAAATAGAGAAAAAGGTAAAGAAATAGATA GATTTCCTGATTTTGATGAGATTGAATTAGACCCTTTACTTTATCAAATTTCATGCTCTTCTTTGGGATTTGCTGATGAA AAATGTATTAATAAAAAATATAATTTTTACACTGCTTTAAGGCTTTTAACTTCACAACTATTTCCATTTTTTGCTTCTAT TGCAGGGAGTGTATTATTAATTAGGTATGCATTTATTTTCTTAAGAAAGAAAAATACTCCATGGCCAGAAATGATATCTC CCCCCCTATCAGTAATAGATATGGTTCTTCTGATCTCTGGTGGTTTCGTTGTTATTGGTGAAGTCGTTTTCCCGGCACTA ATTATACCAATAACAGATTTATTGTTTAATAATTTATCCTCTCCATTAAACCAGTCTCTAAGAGTATTTATTGGTTACTG TTCAATGACCATAGCTCCTTTATTTATAATTAGATATCAATTAATGGGTTTAGTTCCTTCGGGGATTGATGGGGGTTGGC TTCAATGGAAAATCAGACCAATCAAAGAAGGACTTTTTAAATCAATAAGTGGATGGTTAATGATTATGCCTTTAGTGCTG CTTATTGGGTGGCTAATGAATGAGATTATTGGTGACCAAGGAGGAAGTAATCCTTTATTGGAATTGGTTTTAGGTAGTGA TGAATTCTTTCCATTATTTTTGCTTTTAATTACAACTGTTGTTTTGGCTCCAGTTTTTGAGGAGTTAGTTTTTAGGGGTA TTCTTTTGCCTGTATTGGTATCCAAAGTTGGCAAAGCTAGCGGAGTTTTATTAAGTGCCTTGATCTTTGCTTTGGCTCAT TTAAGTGTAGGGGAATTACCTCCTCTATTTGTATTAGGAATTGGTCTTGGTTTGATGAGATTGAGCTCAGGAAGGTTATT TCCTTGTGCTCTTATGCATTCCCTATGGAATGGAGTCACTTTTATTAGTCTACTATTAGTAGCTTGA
Upstream 100 bases:
>100_bases TGTCTTCTAGATATTTATGGTATTAGCCATGAGGGCAATCTAATCTTCTTTTAGTAAAGATAGAAGTCTTTCTCCATGTC AGTCTTCACAAGTTGATTTT
Downstream 100 bases:
>100_bases GATTAAATAAAAAAAATATCAGTATACCAGCTCTTGCAGTTGCTTGATCAAGGTGTTTGACTTGAATTACTTTCGAATTT TGATTTGATTAGTCGCACTC
Product: membrane-associated protease
Products: NA
Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA
Sequences:
>Translated_448_residues MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA >Mature_448_residues MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49966; Mature: 49966
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH QEVFLGSEPQEKLYQALSDIPLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVK HHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHH GYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADEKCINKKYNFYTALRLLTSQL HHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH FPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRP HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEH IKEGLFKSISGWLMIMPLVLLIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH VLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAHLSVGELPPLFVLGIGLGLMR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSSGRLFPCALMHSLWNGVTFISLLLVA HCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH QEVFLGSEPQEKLYQALSDIPLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVK HHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHH GYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADEKCINKKYNFYTALRLLTSQL HHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH FPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRP HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEH IKEGLFKSISGWLMIMPLVLLIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH VLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAHLSVGELPPLFVLGIGLGLMR HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSSGRLFPCALMHSLWNGVTFISLLLVA HCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA