Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124025284

Identifier: 124025284

GI number: 124025284

Start: 518307

End: 519653

Strand: Direct

Name: 124025284

Synonym: NATL1_05731

Alternate gene names: NA

Gene position: 518307-519653 (Clockwise)

Preceding gene: 124025282

Following gene: 124025285

Centisome position: 27.8

GC content: 34.3

Gene sequence:

>1347_bases
ATGAGACAAGCAAAAACTGGTTGGAAATGGGCGATCGCTCTATTTTCATTGCTTTTAACTGTTCTGATATGGCAACAAGG
TTTGCAAGAAAGCTTTGAACGTCCCTCAGTAGCTCCAAAGATTTCTTTGATGCAAACTGAGATGGCAGTTTCAGCTTCTT
CATCGTTACCTGAAACAATACAAGAAGTATTTTTAGGTTCAGAACCTCAAGAAAAACTTTATCAAGCTCTCAGTGACATT
CCTTTGGGACAAATTGAGGATAGAGAAAGATTGTTATTAGCAATTCTCGAAGAGTCTGAGAATGAGCAAAAATTTATCTT
GAAGGAAGGTTTTAGTGATAAGAATTTTGAAACAGTTAAAGGCTATATATTAAATAGAGAAAAAGGTAAAGAAATAGATA
GATTTCCTGATTTTGATGAGATTGAATTAGACCCTTTACTTTATCAAATTTCATGCTCTTCTTTGGGATTTGCTGATGAA
AAATGTATTAATAAAAAATATAATTTTTACACTGCTTTAAGGCTTTTAACTTCACAACTATTTCCATTTTTTGCTTCTAT
TGCAGGGAGTGTATTATTAATTAGGTATGCATTTATTTTCTTAAGAAAGAAAAATACTCCATGGCCAGAAATGATATCTC
CCCCCCTATCAGTAATAGATATGGTTCTTCTGATCTCTGGTGGTTTCGTTGTTATTGGTGAAGTCGTTTTCCCGGCACTA
ATTATACCAATAACAGATTTATTGTTTAATAATTTATCCTCTCCATTAAACCAGTCTCTAAGAGTATTTATTGGTTACTG
TTCAATGACCATAGCTCCTTTATTTATAATTAGATATCAATTAATGGGTTTAGTTCCTTCGGGGATTGATGGGGGTTGGC
TTCAATGGAAAATCAGACCAATCAAAGAAGGACTTTTTAAATCAATAAGTGGATGGTTAATGATTATGCCTTTAGTGCTG
CTTATTGGGTGGCTAATGAATGAGATTATTGGTGACCAAGGAGGAAGTAATCCTTTATTGGAATTGGTTTTAGGTAGTGA
TGAATTCTTTCCATTATTTTTGCTTTTAATTACAACTGTTGTTTTGGCTCCAGTTTTTGAGGAGTTAGTTTTTAGGGGTA
TTCTTTTGCCTGTATTGGTATCCAAAGTTGGCAAAGCTAGCGGAGTTTTATTAAGTGCCTTGATCTTTGCTTTGGCTCAT
TTAAGTGTAGGGGAATTACCTCCTCTATTTGTATTAGGAATTGGTCTTGGTTTGATGAGATTGAGCTCAGGAAGGTTATT
TCCTTGTGCTCTTATGCATTCCCTATGGAATGGAGTCACTTTTATTAGTCTACTATTAGTAGCTTGA

Upstream 100 bases:

>100_bases
TGTCTTCTAGATATTTATGGTATTAGCCATGAGGGCAATCTAATCTTCTTTTAGTAAAGATAGAAGTCTTTCTCCATGTC
AGTCTTCACAAGTTGATTTT

Downstream 100 bases:

>100_bases
GATTAAATAAAAAAAATATCAGTATACCAGCTCTTGCAGTTGCTTGATCAAGGTGTTTGACTTGAATTACTTTCGAATTT
TGATTTGATTAGTCGCACTC

Product: membrane-associated protease

Products: NA

Alternate protein names: Membrane-Associated Protease; Metal-Dependent Membrane Protease; Membrane Associated Protease; CAAX Amino Terminal Protease Family Protein; CAAX Amino Terminal Protease Family; Caax Amino Terminal Protease Family Protein; Membrane Associated Protease-Like; CAAX Amino Protease

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI
PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE
KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL
IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL
LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH
LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA

Sequences:

>Translated_448_residues
MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI
PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE
KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL
IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL
LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH
LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA
>Mature_448_residues
MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETIQEVFLGSEPQEKLYQALSDI
PLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVKGYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADE
KCINKKYNFYTALRLLTSQLFPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL
IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRPIKEGLFKSISGWLMIMPLVL
LIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTVVLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAH
LSVGELPPLFVLGIGLGLMRLSSGRLFPCALMHSLWNGVTFISLLLVA

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49966; Mature: 49966

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
QEVFLGSEPQEKLYQALSDIPLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVK
HHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHH
GYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADEKCINKKYNFYTALRLLTSQL
HHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
FPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEH
IKEGLFKSISGWLMIMPLVLLIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
VLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAHLSVGELPPLFVLGIGLGLMR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LSSGRLFPCALMHSLWNGVTFISLLLVA
HCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRQAKTGWKWAIALFSLLLTVLIWQQGLQESFERPSVAPKISLMQTEMAVSASSSLPETI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH
QEVFLGSEPQEKLYQALSDIPLGQIEDRERLLLAILEESENEQKFILKEGFSDKNFETVK
HHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHH
GYILNREKGKEIDRFPDFDEIELDPLLYQISCSSLGFADEKCINKKYNFYTALRLLTSQL
HHHCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
FPFFASIAGSVLLIRYAFIFLRKKNTPWPEMISPPLSVIDMVLLISGGFVVIGEVVFPAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
IIPITDLLFNNLSSPLNQSLRVFIGYCSMTIAPLFIIRYQLMGLVPSGIDGGWLQWKIRP
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEH
IKEGLFKSISGWLMIMPLVLLIGWLMNEIIGDQGGSNPLLELVLGSDEFFPLFLLLITTV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
VLAPVFEELVFRGILLPVLVSKVGKASGVLLSALIFALAHLSVGELPPLFVLGIGLGLMR
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LSSGRLFPCALMHSLWNGVTFISLLLVA
HCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA