Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025224
Identifier: 124025224
GI number: 124025224
Start: 468160
End: 468657
Strand: Reverse
Name: 124025224
Synonym: NATL1_05131
Alternate gene names: NA
Gene position: 468657-468160 (Counterclockwise)
Preceding gene: 124025225
Following gene: 124025222
Centisome position: 25.13
GC content: 31.93
Gene sequence:
>498_bases TTGGAAAAAAGTGAAGAAAGAAAAAGCGGTAGTTCTCATGTCGCAAATAAAAAATCCTCATTACGAACTGTTGGTGAGTT TCTCAGAGAAGCCCGACAAGGTAGAAATCTTTCAGTAGAGGATCTATCTTCCTCACTAAGAATTGGGAAAGAACAATTGA TTGCACTTGAATCAGGGGACGAAAGCGCACTTCCTGAAAAAGTTTTTATTAGAGCAATGGTTCGAAGAATTGCCGAGAAA TTAAACTTAGATACAAGTTTTATTCTTGAAGAACTTAATGAAAAGAAAAAAAATGAACCTAAACCTAGCCCTGTGATTAA GAAGAAAAATACTAGAAAAAACAAAAAGTTCAATCCATTTATCATTGTAATTTTATCGGGTGCTTTAGGATTATTTACTT CAATTATGCTATTAAAATATATTGAAAAAGGACAAAATGATTCCCTTAATCCTCAGCGAAGTGATATCTTTTTATTAGAC AAAAAGATATCTTCTTAA
Upstream 100 bases:
>100_bases TGTATTTTAACAATGACTAGAGCTAGAGATAAATTATCTTTTAGAGACAAACGACTTTACAGAGCCTTTAGAATAATCTA AATACCCAAAAGGTTTTTAA
Downstream 100 bases:
>100_bases AGTATATTTATATCAACATCCATAATCTTTTTAACAAGTAAAATTGCCTTAGTTAAGCTCCATTTCTCAAGATCTAAATT TTGGCCTAAGTTATTAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MEKSEERKSGSSHVANKKSSLRTVGEFLREARQGRNLSVEDLSSSLRIGKEQLIALESGDESALPEKVFIRAMVRRIAEK LNLDTSFILEELNEKKKNEPKPSPVIKKKNTRKNKKFNPFIIVILSGALGLFTSIMLLKYIEKGQNDSLNPQRSDIFLLD KKISS
Sequences:
>Translated_165_residues MEKSEERKSGSSHVANKKSSLRTVGEFLREARQGRNLSVEDLSSSLRIGKEQLIALESGDESALPEKVFIRAMVRRIAEK LNLDTSFILEELNEKKKNEPKPSPVIKKKNTRKNKKFNPFIIVILSGALGLFTSIMLLKYIEKGQNDSLNPQRSDIFLLD KKISS >Mature_165_residues MEKSEERKSGSSHVANKKSSLRTVGEFLREARQGRNLSVEDLSSSLRIGKEQLIALESGDESALPEKVFIRAMVRRIAEK LNLDTSFILEELNEKKKNEPKPSPVIKKKNTRKNKKFNPFIIVILSGALGLFTSIMLLKYIEKGQNDSLNPQRSDIFLLD KKISS
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18673; Mature: 18673
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSEERKSGSSHVANKKSSLRTVGEFLREARQGRNLSVEDLSSSLRIGKEQLIALESGD CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEEEECCCC ESALPEKVFIRAMVRRIAEKLNLDTSFILEELNEKKKNEPKPSPVIKKKNTRKNKKFNPF CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE IIVILSGALGLFTSIMLLKYIEKGQNDSLNPQRSDIFLLDKKISS EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MEKSEERKSGSSHVANKKSSLRTVGEFLREARQGRNLSVEDLSSSLRIGKEQLIALESGD CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHEEEECCCC ESALPEKVFIRAMVRRIAEKLNLDTSFILEELNEKKKNEPKPSPVIKKKNTRKNKKFNPF CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE IIVILSGALGLFTSIMLLKYIEKGQNDSLNPQRSDIFLLDKKISS EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA