| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is pgk [H]
Identifier: 124027813
GI number: 124027813
Start: 946984
End: 948267
Strand: Reverse
Name: pgk [H]
Synonym: Hbut_0940
Alternate gene names: 124027813
Gene position: 948267-946984 (Counterclockwise)
Preceding gene: 124027814
Following gene: 124027812
Centisome position: 56.88
GC content: 52.1
Gene sequence:
>1284_bases TTGCCGTGCCTTCTCCGTAATGGAGAGGTTATACCCACCATTGACGACCTTGACGAGAATTATGGTGTAAAGGGTTCTAA AATACTTGTGAGAATCGATATTAACAGCCCCATAGATCCCAGGACTGGCCGCATACTCGACGACACACGTATCAGAGCTC ATGCCAAGACTATCAGAGAGCTTTCTGAACGCGGCGCAGCCGTAGTACTAATCTCGCACCAGGGCAGACCCGGTGAGCCA GACTTTACGAGCCTAGAGCCACACAGCAAGGTTCTCTCAGACCGGCTCGGCATGACGGTAAAGTTTGTTGATGACGTTAT CGGCCCCGCAGCAAGGCAGGCAATAAAGGAGCTTAAACCCGGCGAGATACTACTCTTGGATAACACGAGACTCGTATCGG AGGAGATCATAGAGGCTACACCGGAAAAGCATGCCGGAAGCATCTTCGTGCAAAGGCTAGCCCCCCTCTTCAACTACTAT ATAAACGACGCATTTGCAACCGCCCACCGCAGCCAGCCGAGCATCGTCGGATTCCCAATGCTACTCCCATCAGCTGCTGG CAGAGTTCTCGAGAGAGAGCTGCACGCGCTATCAAAACTCTACAAGCCAGAGGAGAGGCCGAGAGTATTTGTCCTGGGAG GAGGTAAGGTCCACGATACGCTTAGGATACTGGAGTACTTGCACGCAAACCGAGCCGCTGACCGCATTCTTGCAACAGGC CTCGTAGCAGAACTGTTCATGGTTGCCAAGGGCATAAACATCGGTAGGAAAAACATTGAAGTCCTTGAGGCTAAGGGTAT TCTAGCACTAGTTCCCAGGGCACGCAGGCTACTGCTGAGAGGCCTTCCCCTTGAAACACCAGTGGACTTCGTAACAGAGC ATAATGGCGAGGTACGTGTAGAAGCTGTTGGCACAGGCATAGAAGGTGTAATAAGAGACATAGGGCCTCAGACCATCTCA ATGTACTCCGAGATGATGAAGGAAGCTAGGCTAATAGTACTCAGAGGCCCCGCTGGCGTCATAGAGGATCCAAGATTTAG GAAAGGCACCGAAGAACTGGTGAAATCTGCAGCAGAGTCAAACGCCTATGTAATAATCGGCGGCGGCCACCTCAACGTAA TAGCCTCCAACCTAGGGCTAGCCGATAAGGAAAACATGCACCTAAGTACTGGCGGTGGAGCACTCCTCTTATTCCTCGCA GGCGAAGACCTACCCGGCCTCACAGCCCTCGCAAAATCTGCTCGTAAGTTCTTCCCCCAGCTCTCAGCCAAACACTCCAC ATAA
Upstream 100 bases:
>100_bases GGTATCTCCTCAACGCCCGTTAGCAGCTGTTTTAACTTATGCGCGGCTCTTTTAGCTTCCCCCGGATGCAGTATACTACC CTCCCCACTCGGGAGCGCTT
Downstream 100 bases:
>100_bases ACCACTACAAGCTCTTCCCCCTGAGAGGTGAAGAGCCGTGGCACGGGTTAGGGTTGGCGTAAACGGGTTTGGAACTATAG GTAAGCGTGTAGCTGAGGCA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MPCLLRNGEVIPTIDDLDENYGVKGSKILVRIDINSPIDPRTGRILDDTRIRAHAKTIRELSERGAAVVLISHQGRPGEP DFTSLEPHSKVLSDRLGMTVKFVDDVIGPAARQAIKELKPGEILLLDNTRLVSEEIIEATPEKHAGSIFVQRLAPLFNYY INDAFATAHRSQPSIVGFPMLLPSAAGRVLERELHALSKLYKPEERPRVFVLGGGKVHDTLRILEYLHANRAADRILATG LVAELFMVAKGINIGRKNIEVLEAKGILALVPRARRLLLRGLPLETPVDFVTEHNGEVRVEAVGTGIEGVIRDIGPQTIS MYSEMMKEARLIVLRGPAGVIEDPRFRKGTEELVKSAAESNAYVIIGGGHLNVIASNLGLADKENMHLSTGGGALLLFLA GEDLPGLTALAKSARKFFPQLSAKHST
Sequences:
>Translated_427_residues MPCLLRNGEVIPTIDDLDENYGVKGSKILVRIDINSPIDPRTGRILDDTRIRAHAKTIRELSERGAAVVLISHQGRPGEP DFTSLEPHSKVLSDRLGMTVKFVDDVIGPAARQAIKELKPGEILLLDNTRLVSEEIIEATPEKHAGSIFVQRLAPLFNYY INDAFATAHRSQPSIVGFPMLLPSAAGRVLERELHALSKLYKPEERPRVFVLGGGKVHDTLRILEYLHANRAADRILATG LVAELFMVAKGINIGRKNIEVLEAKGILALVPRARRLLLRGLPLETPVDFVTEHNGEVRVEAVGTGIEGVIRDIGPQTIS MYSEMMKEARLIVLRGPAGVIEDPRFRKGTEELVKSAAESNAYVIIGGGHLNVIASNLGLADKENMHLSTGGGALLLFLA GEDLPGLTALAKSARKFFPQLSAKHST >Mature_426_residues PCLLRNGEVIPTIDDLDENYGVKGSKILVRIDINSPIDPRTGRILDDTRIRAHAKTIRELSERGAAVVLISHQGRPGEPD FTSLEPHSKVLSDRLGMTVKFVDDVIGPAARQAIKELKPGEILLLDNTRLVSEEIIEATPEKHAGSIFVQRLAPLFNYYI NDAFATAHRSQPSIVGFPMLLPSAAGRVLERELHALSKLYKPEERPRVFVLGGGKVHDTLRILEYLHANRAADRILATGL VAELFMVAKGINIGRKNIEVLEAKGILALVPRARRLLLRGLPLETPVDFVTEHNGEVRVEAVGTGIEGVIRDIGPQTISM YSEMMKEARLIVLRGPAGVIEDPRFRKGTEELVKSAAESNAYVIIGGGHLNVIASNLGLADKENMHLSTGGGALLLFLAG EDLPGLTALAKSARKFFPQLSAKHST
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=422, Percent_Identity=33.6492890995261, Blast_Score=195, Evalue=8e-50, Organism=Homo sapiens, GI31543397, Length=424, Percent_Identity=33.7264150943396, Blast_Score=193, Evalue=3e-49, Organism=Escherichia coli, GI1789294, Length=409, Percent_Identity=33.7408312958435, Blast_Score=187, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17508823, Length=408, Percent_Identity=34.5588235294118, Blast_Score=185, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6319857, Length=425, Percent_Identity=34.1176470588235, Blast_Score=185, Evalue=1e-47, Organism=Drosophila melanogaster, GI17136394, Length=419, Percent_Identity=34.3675417661098, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581203, Length=417, Percent_Identity=31.6546762589928, Blast_Score=175, Evalue=5e-44,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 46560; Mature: 46429
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCLLRNGEVIPTIDDLDENYGVKGSKILVRIDINSPIDPRTGRILDDTRIRAHAKTIRE CCCEECCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHH LSERGAAVVLISHQGRPGEPDFTSLEPHSKVLSDRLGMTVKFVDDVIGPAARQAIKELKP HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCC GEILLLDNTRLVSEEIIEATPEKHAGSIFVQRLAPLFNYYINDAFATAHRSQPSIVGFPM CCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHH LLPSAAGRVLERELHALSKLYKPEERPRVFVLGGGKVHDTLRILEYLHANRAADRILATG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LVAELFMVAKGINIGRKNIEVLEAKGILALVPRARRLLLRGLPLETPVDFVTEHNGEVRV HHHHHHHHHCCCCCCCCCEEEEECCCHHEECHHHHHHHHHCCCCCCCHHHHHCCCCCEEE EAVGTGIEGVIRDIGPQTISMYSEMMKEARLIVLRGPAGVIEDPRFRKGTEELVKSAAES EEECCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC NAYVIIGGGHLNVIASNLGLADKENMHLSTGGGALLLFLAGEDLPGLTALAKSARKFFPQ CCEEEEECCEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LSAKHST HCCCCCC >Mature Secondary Structure PCLLRNGEVIPTIDDLDENYGVKGSKILVRIDINSPIDPRTGRILDDTRIRAHAKTIRE CCEECCCCCCCCHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCHHHHHHHHHHHH LSERGAAVVLISHQGRPGEPDFTSLEPHSKVLSDRLGMTVKFVDDVIGPAARQAIKELKP HHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHCCC GEILLLDNTRLVSEEIIEATPEKHAGSIFVQRLAPLFNYYINDAFATAHRSQPSIVGFPM CCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHH LLPSAAGRVLERELHALSKLYKPEERPRVFVLGGGKVHDTLRILEYLHANRAADRILATG HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LVAELFMVAKGINIGRKNIEVLEAKGILALVPRARRLLLRGLPLETPVDFVTEHNGEVRV HHHHHHHHHCCCCCCCCCEEEEECCCHHEECHHHHHHHHHCCCCCCCHHHHHCCCCCEEE EAVGTGIEGVIRDIGPQTISMYSEMMKEARLIVLRGPAGVIEDPRFRKGTEELVKSAAES EEECCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCC NAYVIIGGGHLNVIASNLGLADKENMHLSTGGGALLLFLAGEDLPGLTALAKSARKFFPQ CCEEEEECCEEEEEECCCCCCCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHH LSAKHST HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA