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The map label for this gene is gap

Identifier: 124027812

GI number: 124027812

Start: 945915

End: 946946

Strand: Reverse

Name: gap

Synonym: Hbut_0939

Alternate gene names: 124027812

Gene position: 946946-945915 (Counterclockwise)

Preceding gene: 124027813

Following gene: 124027811

Centisome position: 56.8

GC content: 50.19

Gene sequence:

>1032_bases
GTGGCACGGGTTAGGGTTGGCGTAAACGGGTTTGGAACTATAGGTAAGCGTGTAGCTGAGGCAATAATGCTCCAGCCTGA
CATGGAGCTTGTTGGTGTCACAAAAACAAAACCAGACTATACCGCAAAATATGCTGTGTCCAGGGGAATACCTGTCTACG
TGCCAAAAGAGAGCCTAGAGGAGTTTCAAGCTAAGGGCATAGAGCCAGCTGGCACCATAGAGGAGCTGCTCGAGAAAGTC
GATGTCATAGTCGACGCTACGCCCGGAGGTACTGGTAGAAAGTATAAGCCTCTCTACGAGAAAGCCGGGGTCAAGATGAT
ATTTCAGGGCGGTGAAAAAGCCGACATAGCAGAGCTATCGTTTAGCACTCTCTGTAACTACGAACAAGCACTTGGCAAAA
CCTCGCTGCGTGTGGTATCCTGCAACACTACCGGCCTTCTACGTGCCATCTGTAGTATATCAAGACTAGCCCCCGTAAGG
CGCGTAAGAGCAACCATTGTCCGGAGGGCTGCAGATCCTAAGGAGATTAAACGTGGCCCTGTCAACGCGATAAAGCCTGA
TCCTGTAAAGACGCCTAGCCATCACGCTCTTGACGTTAAGACTGTATTGCCAGACCTCGACATAGTAACTATGGCAGTAG
TGGTTCCAACAACACTAATGCACGTACATATAGTCTACGCTGAACTCGAGAAGCCTGTAACAAGAGAGGACGTGGTAGCA
ACATTCGAGTCCACACCAAGAATACTGCTCGCCGACGCAAGCTACGGGCTAGCAAGCACTGCCGAGCTAGTAGAGTATGC
TAGGGACCTAGGCAGAAAGCGCTACGACATCCCAGAGCTAATAGTATGGCTTGACAGTATAGCCGTTAACGGCGTTGAGG
TTATGTGGATGCAAGCAGTACACCAAGAGGCAATCGTAGTGCCAGAAAACATCGATGCTATAAGGGCTGTGGCAGAGTTA
GCCAAGACAGCCGAGGAGACCATAAGGATAACCGATGAGAGACTCGGCCTCTTGAAGGGCAGAATACCATAA

Upstream 100 bases:

>100_bases
ACAGCCCTCGCAAAATCTGCTCGTAAGTTCTTCCCCCAGCTCTCAGCCAAACACTCCACATAAACCACTACAAGCTCTTC
CCCCTGAGAGGTGAAGAGCC

Downstream 100 bases:

>100_bases
CAACCAAGCCAACGCCATAGGGGCTATAACTTATTACCATACACCCAGACAAGAAAGCAATAAGATAATATGGATGGTCA
GCAAACTAGCAAACCCGCAT

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MARVRVGVNGFGTIGKRVAEAIMLQPDMELVGVTKTKPDYTAKYAVSRGIPVYVPKESLEEFQAKGIEPAGTIEELLEKV
DVIVDATPGGTGRKYKPLYEKAGVKMIFQGGEKADIAELSFSTLCNYEQALGKTSLRVVSCNTTGLLRAICSISRLAPVR
RVRATIVRRAADPKEIKRGPVNAIKPDPVKTPSHHALDVKTVLPDLDIVTMAVVVPTTLMHVHIVYAELEKPVTREDVVA
TFESTPRILLADASYGLASTAELVEYARDLGRKRYDIPELIVWLDSIAVNGVEVMWMQAVHQEAIVVPENIDAIRAVAEL
AKTAEETIRITDERLGLLKGRIP

Sequences:

>Translated_343_residues
MARVRVGVNGFGTIGKRVAEAIMLQPDMELVGVTKTKPDYTAKYAVSRGIPVYVPKESLEEFQAKGIEPAGTIEELLEKV
DVIVDATPGGTGRKYKPLYEKAGVKMIFQGGEKADIAELSFSTLCNYEQALGKTSLRVVSCNTTGLLRAICSISRLAPVR
RVRATIVRRAADPKEIKRGPVNAIKPDPVKTPSHHALDVKTVLPDLDIVTMAVVVPTTLMHVHIVYAELEKPVTREDVVA
TFESTPRILLADASYGLASTAELVEYARDLGRKRYDIPELIVWLDSIAVNGVEVMWMQAVHQEAIVVPENIDAIRAVAEL
AKTAEETIRITDERLGLLKGRIP
>Mature_342_residues
ARVRVGVNGFGTIGKRVAEAIMLQPDMELVGVTKTKPDYTAKYAVSRGIPVYVPKESLEEFQAKGIEPAGTIEELLEKVD
VIVDATPGGTGRKYKPLYEKAGVKMIFQGGEKADIAELSFSTLCNYEQALGKTSLRVVSCNTTGLLRAICSISRLAPVRR
VRATIVRRAADPKEIKRGPVNAIKPDPVKTPSHHALDVKTVLPDLDIVTMAVVVPTTLMHVHIVYAELEKPVTREDVVAT
FESTPRILLADASYGLASTAELVEYARDLGRKRYDIPELIVWLDSIAVNGVEVMWMQAVHQEAIVVPENIDAIRAVAELA
KTAEETIRITDERLGLLKGRIP

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): G3P_HYPBU (A2BLC6)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013132.1
- ProteinModelPortal:   A2BLC6
- SMR:   A2BLC6
- STRING:   A2BLC6
- GeneID:   4782951
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0939
- eggNOG:   arNOG04694
- HOGENOM:   HBG392099
- OMA:   HHGPDVQ
- ProtClustDB:   PRK04207
- BioCyc:   HBUT415426:HBUT_0939-MONOMER
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_00559
- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PANTHER:   PTHR10836
- PIRSF:   PIRSF000149
- SMART:   SM00846
- TIGRFAMs:   TIGR01546

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N

EC number: =1.2.1.59

Molecular weight: Translated: 37560; Mature: 37429

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: PS00071 GAPDH

Important sites: ACT_SITE 141-141 BINDING 111-111 BINDING 169-169 BINDING 302-302

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVRVGVNGFGTIGKRVAEAIMLQPDMELVGVTKTKPDYTAKYAVSRGIPVYVPKESLE
CCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEEECHHHHH
EFQAKGIEPAGTIEELLEKVDVIVDATPGGTGRKYKPLYEKAGVKMIFQGGEKADIAELS
HHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCEEEEECCCCCHHHHHH
FSTLCNYEQALGKTSLRVVSCNTTGLLRAICSISRLAPVRRVRATIVRRAADPKEIKRGP
HHHHHCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
VNAIKPDPVKTPSHHALDVKTVLPDLDIVTMAVVVPTTLMHVHIVYAELEKPVTREDVVA
CCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TFESTPRILLADASYGLASTAELVEYARDLGRKRYDIPELIVWLDSIAVNGVEVMWMQAV
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
HQEAIVVPENIDAIRAVAELAKTAEETIRITDERLGLLKGRIP
HHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ARVRVGVNGFGTIGKRVAEAIMLQPDMELVGVTKTKPDYTAKYAVSRGIPVYVPKESLE
CEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHCCCEEEECHHHHH
EFQAKGIEPAGTIEELLEKVDVIVDATPGGTGRKYKPLYEKAGVKMIFQGGEKADIAELS
HHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCCEEEEECCCCCHHHHHH
FSTLCNYEQALGKTSLRVVSCNTTGLLRAICSISRLAPVRRVRATIVRRAADPKEIKRGP
HHHHHCHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
VNAIKPDPVKTPSHHALDVKTVLPDLDIVTMAVVVPTTLMHVHIVYAELEKPVTREDVVA
CCCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
TFESTPRILLADASYGLASTAELVEYARDLGRKRYDIPELIVWLDSIAVNGVEVMWMQAV
HHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
HQEAIVVPENIDAIRAVAELAKTAEETIRITDERLGLLKGRIP
HHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA