Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966026
Identifier: 123966026
GI number: 123966026
Start: 714279
End: 714815
Strand: Direct
Name: 123966026
Synonym: P9515_07911
Alternate gene names: NA
Gene position: 714279-714815 (Clockwise)
Preceding gene: 123966025
Following gene: 123966027
Centisome position: 41.91
GC content: 31.84
Gene sequence:
>537_bases ATGAACGATCATAAATCCCAAGATAATTACGAGGCTCAGACTCTTATTTTAAATGACTCAAATGGAAATGAATTATTTTG TTATCTCGAACAAATTGTAAAAGTTGAAGAAAAAGAATATGCATTATTAACACCAGTTGATACTCCAGTAAGTCTTTTTA AAATAAATGATAAAGAGGAACCAGAATTAATTGAAAAAATTGAGAAAAATGAACAGGTTTTAAAGAATGCTGATGCCGTA CTTCAAGAACATGATCTGAAACTTATAAGGTCCGCTGTAACATTAACTGTATCAGGGGAACTCGAAGAGCCTATTTATGA TGAGTTAGAAGAAGATGAACTTGATGATGAAAGTGAGACATATGAATTACTTGTAAGTTTTAATTTGTTAGAGCAAGAAT ACGGATTATATATCCCTTTAGATCCTTTTTTTATTGTTGGAAAAATTATAGGGAAAGGGGCCTCACTAATTGAGGACGAT GAGTTTGATAAAGTCCAGCCTTTAATCGAGTCTGAGTTGGAAAAGAGTAGTTTGTAA
Upstream 100 bases:
>100_bases AATTCTTGAACAATGGATTCAGGAAGGTCCTGAGTTAAAAGAATTAATGGGTAATAAACAAATATAATATTAGTATAAAT CTATATAAGTTAAATCAAAA
Downstream 100 bases:
>100_bases AATAATGAATTCTTTTGTAAAAGCCGATTGGGATTCTAAACTACCCATATATGAGATATCTCATTTAAAACTACAAAAAG AAGGAATTAAAAGCTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNDHKSQDNYEAQTLILNDSNGNELFCYLEQIVKVEEKEYALLTPVDTPVSLFKINDKEEPELIEKIEKNEQVLKNADAV LQEHDLKLIRSAVTLTVSGELEEPIYDELEEDELDDESETYELLVSFNLLEQEYGLYIPLDPFFIVGKIIGKGASLIEDD EFDKVQPLIESELEKSSL
Sequences:
>Translated_178_residues MNDHKSQDNYEAQTLILNDSNGNELFCYLEQIVKVEEKEYALLTPVDTPVSLFKINDKEEPELIEKIEKNEQVLKNADAV LQEHDLKLIRSAVTLTVSGELEEPIYDELEEDELDDESETYELLVSFNLLEQEYGLYIPLDPFFIVGKIIGKGASLIEDD EFDKVQPLIESELEKSSL >Mature_178_residues MNDHKSQDNYEAQTLILNDSNGNELFCYLEQIVKVEEKEYALLTPVDTPVSLFKINDKEEPELIEKIEKNEQVLKNADAV LQEHDLKLIRSAVTLTVSGELEEPIYDELEEDELDDESETYELLVSFNLLEQEYGLYIPLDPFFIVGKIIGKGASLIEDD EFDKVQPLIESELEKSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20415; Mature: 20415
Theoretical pI: Translated: 3.79; Mature: 3.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHKSQDNYEAQTLILNDSNGNELFCYLEQIVKVEEKEYALLTPVDTPVSLFKINDKEE CCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCC PELIEKIEKNEQVLKNADAVLQEHDLKLIRSAVTLTVSGELEEPIYDELEEDELDDESET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCHHH YELLVSFNLLEQEYGLYIPLDPFFIVGKIIGKGASLIEDDEFDKVQPLIESELEKSSL HHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDHKSQDNYEAQTLILNDSNGNELFCYLEQIVKVEEKEYALLTPVDTPVSLFKINDKEE CCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCC PELIEKIEKNEQVLKNADAVLQEHDLKLIRSAVTLTVSGELEEPIYDELEEDELDDESET HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCCCCHHH YELLVSFNLLEQEYGLYIPLDPFFIVGKIIGKGASLIEDDEFDKVQPLIESELEKSSL HHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA