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The map label for this gene is yqgF [C]

Identifier: 123966025

GI number: 123966025

Start: 713790

End: 714245

Strand: Direct

Name: yqgF [C]

Synonym: P9515_07901

Alternate gene names: 123966025

Gene position: 713790-714245 (Clockwise)

Preceding gene: 123966024

Following gene: 123966026

Centisome position: 41.88

GC content: 31.14

Gene sequence:

>456_bases
GTGAAATATTCTAAGCCTAAATCTAAATCAATATTAAGTTTAGATATAGGGACAAAAAGAATAGGATTAGCCTATTGTGA
TTCACTATTTATTACGGTAAATATTCTTCCTGCATTAAGGAGAGAAAAAAACAAGAATGAGTTCAAAACTATTAAAAGCC
ACATTAAAAAACTTAATTTAACTGGTTTTATTGTTGGCTTACCACTTGATGATAAAGGGAGAATGACATCTCAAGCTTTT
GATTGCAAAACTTATGGGGAATATCTTTTTAATGAGTTAAAACTCCCATTCTCCTTTGTTAACGAACATAGTTCAACTTG
GGAATCAGAAAACAGATTCGGGGTCAAGAAAGATAAATCAGGGCTTATCGATAGCTTATCTGCCAAAGTAATTCTTGAAC
AATGGATTCAGGAAGGTCCTGAGTTAAAAGAATTAATGGGTAATAAACAAATATAA

Upstream 100 bases:

>100_bases
ATAAACAGACTAATAAAATAAACCAATCATTAGAATCAATTTTTGGAAAATTAAATCCGCAAGGCAATGCTTACCCATCT
CCATTTCCTTTGAAGTCCAA

Downstream 100 bases:

>100_bases
TATTAGTATAAATCTATATAAGTTAAATCAAAAATGAACGATCATAAATCCCAAGATAATTACGAGGCTCAGACTCTTAT
TTTAAATGACTCAAATGGAA

Product: endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKYSKPKSKSILSLDIGTKRIGLAYCDSLFITVNILPALRREKNKNEFKTIKSHIKKLNLTGFIVGLPLDDKGRMTSQAF
DCKTYGEYLFNELKLPFSFVNEHSSTWESENRFGVKKDKSGLIDSLSAKVILEQWIQEGPELKELMGNKQI

Sequences:

>Translated_151_residues
MKYSKPKSKSILSLDIGTKRIGLAYCDSLFITVNILPALRREKNKNEFKTIKSHIKKLNLTGFIVGLPLDDKGRMTSQAF
DCKTYGEYLFNELKLPFSFVNEHSSTWESENRFGVKKDKSGLIDSLSAKVILEQWIQEGPELKELMGNKQI
>Mature_151_residues
MKYSKPKSKSILSLDIGTKRIGLAYCDSLFITVNILPALRREKNKNEFKTIKSHIKKLNLTGFIVGLPLDDKGRMTSQAF
DCKTYGEYLFNELKLPFSFVNEHSSTWESENRFGVKKDKSGLIDSLSAKVILEQWIQEGPELKELMGNKQI

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_PROM5 (A2BW38)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011106.1
- ProteinModelPortal:   A2BW38
- SMR:   A2BW38
- STRING:   A2BW38
- GeneID:   4719455
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_07901
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   NEHSSTW
- ProtClustDB:   CLSK919441
- BioCyc:   PMAR167542:P9515ORF_0831-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 17248; Mature: 17248

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSKPKSKSILSLDIGTKRIGLAYCDSLFITVNILPALRREKNKNEFKTIKSHIKKLNL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
TGFIVGLPLDDKGRMTSQAFDCKTYGEYLFNELKLPFSFVNEHSSTWESENRFGVKKDKS
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC
GLIDSLSAKVILEQWIQEGPELKELMGNKQI
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC
>Mature Secondary Structure
MKYSKPKSKSILSLDIGTKRIGLAYCDSLFITVNILPALRREKNKNEFKTIKSHIKKLNL
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
TGFIVGLPLDDKGRMTSQAFDCKTYGEYLFNELKLPFSFVNEHSSTWESENRFGVKKDKS
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC
GLIDSLSAKVILEQWIQEGPELKELMGNKQI
HHHHHHHHHHHHHHHHHCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA