Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
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Accession | NC_008817 |
Length | 1,704,176 |
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The map label for this gene is 123966027
Identifier: 123966027
GI number: 123966027
Start: 714820
End: 715314
Strand: Direct
Name: 123966027
Synonym: P9515_07921
Alternate gene names: NA
Gene position: 714820-715314 (Clockwise)
Preceding gene: 123966026
Following gene: 123966028
Centisome position: 41.95
GC content: 27.88
Gene sequence:
>495_bases ATGAATTCTTTTGTAAAAGCCGATTGGGATTCTAAACTACCCATATATGAGATATCTCATTTAAAACTACAAAAAGAAGG AATTAAAAGCTTATTAATTGATGTTGATGGTACATTATTAAGCCGACAATCAAATGTAATTCCAATAAATGTTAAAAATT GGATCAAGGAATCAAAAAAGTTATTCTCTATGTATTTAATAAGTAATAACCCTTCTGATAAACGTATTAGAAAGATAGCC AAGGAATTAGATCTCAGATATAAATCAAACGCACTAAAACCAAGAAAAAAAATTACTTTAGATGTAATTTCAGAAATCAA AGAGGATTCGCGAAACATCGCTATAATCGGAGATCGAATCTTTACGGATATAATCGTAGGAAATAGATGTAATATCCAGA CGATCTTAGTAAAAAGATTAAGCAGAGAGGGTTTGCCGATAAAAATAAATTTAACATTAATACTAGAAAAATTGATTTCT ACTTTTTTAAAATGA
Upstream 100 bases:
>100_bases AAAATTATAGGGAAAGGGGCCTCACTAATTGAGGACGATGAGTTTGATAAAGTCCAGCCTTTAATCGAGTCTGAGTTGGA AAAGAGTAGTTTGTAAAATA
Downstream 100 bases:
>100_bases AAACGTGGGTCGTTAAAGTTGGTACTAGTATTCTCAGAGGGACAAATGAGAAATCTACAGAACAAGTAATAGAAAGTTTA TGTAAATCTTTAACAAGTTT
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: HAD Superfamily Phosphatase TIGR; HAD Superfamily Hydrolase; HAD-Superfamily Hydrolase; HAD Superfamily Phosphatase; Had Superfamily Phosphatase; Hydrolase Of HAD Superfamily Protein; Hydrolase HAD Subfamily IIIA; Had-Superfamily Phosphatase Subfamily IIIa; HAD Superfamily Hydrolase IIIA Phosphatase; Hydrolase Of HAD Superfamily; HAD Phosphatase Subfamily IIIA; HAD-Superfamily Phosphatase Subfamily IIIA Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MNSFVKADWDSKLPIYEISHLKLQKEGIKSLLIDVDGTLLSRQSNVIPINVKNWIKESKKLFSMYLISNNPSDKRIRKIA KELDLRYKSNALKPRKKITLDVISEIKEDSRNIAIIGDRIFTDIIVGNRCNIQTILVKRLSREGLPIKINLTLILEKLIS TFLK
Sequences:
>Translated_164_residues MNSFVKADWDSKLPIYEISHLKLQKEGIKSLLIDVDGTLLSRQSNVIPINVKNWIKESKKLFSMYLISNNPSDKRIRKIA KELDLRYKSNALKPRKKITLDVISEIKEDSRNIAIIGDRIFTDIIVGNRCNIQTILVKRLSREGLPIKINLTLILEKLIS TFLK >Mature_164_residues MNSFVKADWDSKLPIYEISHLKLQKEGIKSLLIDVDGTLLSRQSNVIPINVKNWIKESKKLFSMYLISNNPSDKRIRKIA KELDLRYKSNALKPRKKITLDVISEIKEDSRNIAIIGDRIFTDIIVGNRCNIQTILVKRLSREGLPIKINLTLILEKLIS TFLK
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18916; Mature: 18916
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFVKADWDSKLPIYEISHLKLQKEGIKSLLIDVDGTLLSRQSNVIPINVKNWIKESKK CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEHHHHHHHHHH LFSMYLISNNPSDKRIRKIAKELDLRYKSNALKPRKKITLDVISEIKEDSRNIAIIGDRI HHEEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHH FTDIIVGNRCNIQTILVKRLSREGLPIKINLTLILEKLISTFLK HHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure MNSFVKADWDSKLPIYEISHLKLQKEGIKSLLIDVDGTLLSRQSNVIPINVKNWIKESKK CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEHHHHHHHHHH LFSMYLISNNPSDKRIRKIAKELDLRYKSNALKPRKKITLDVISEIKEDSRNIAIIGDRI HHEEEEECCCCCHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHH FTDIIVGNRCNIQTILVKRLSREGLPIKINLTLILEKLISTFLK HHHHHCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA