Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is opcA [H]
Identifier: 123968712
GI number: 123968712
Start: 992976
End: 994277
Strand: Reverse
Name: opcA [H]
Synonym: A9601_11791
Alternate gene names: 123968712
Gene position: 994277-992976 (Counterclockwise)
Preceding gene: 123968713
Following gene: 123968710
Centisome position: 59.54
GC content: 31.8
Gene sequence:
>1302_bases ATGAAACCTCAACTTACACTTCAAACCCCTTTAGAGCTGCCTTATCAGGAAATTTCTAATTACCTTAATAAATTATGGAT TTCAGAAGATAAAGATAATAGTGGAGCTAATACTTTCACATTAATGGTCTGGCAGCCTGCTTGGCTAGAACAATGTTTGG TTCAAAAAGGATTAGTAAATGGACCAATTACTGGAAACTTAAGTCCAGAGATAATTGAAGTTGCTAAAAAATTTATATTG GATCAAGGACTTCCTATCGCGACTTCACTTAATAGTGAAGAATTATTGAATTTGTTGAAGGAAAATTTATCTAATAAAGA ATTTGATGATTTTAGAGGACAATTTTTTGAATCAACGATAAGTACATTGAATCCAAGAAGATTAATAACTTTAGCGCCAA CCATAAATAAAAATTCAGATATCAAAACTTTTGTATCTGCTTATTGTCCATTAAGTGATACCCCAGCTATGCAACCTATT TGTGGGGATTTAGTTGTTATTAGGGGGGACTCGGCCTCAATATCTAATAAAGGATTAAAAATAATTGATGAATTATCTAT TGATGAATTACCTTCATGGTTGTGGTGGAATGGAAGCTTGGATGAATCGCCTGAAATTTTCGAATATTTTACTGATTATG GTCTAAGGTTAATAATTGATACTGCTCTTGGATCGCCTCAAAGATGTTTAAAAGTTTTAGATCAATTAAATAATTCAAAT AAAGCTATTAATGATTTGAATTGGGTTAGATTGAAAAATTGGAGGGAATCATTGGCAATGATTTTTGATCCGCCTTCGAG GAGACCGATTTTAGATCATATTACTGATATTGACATTGATATCGCAGGAGATCATATGATTCAAGCGTTGTTTTTGATTT CATGGATTAGCGATAAACTTGGTTGGTCTTTTCTAAGAGTTGAAACGGATACAGAATCAACAAAAATAGAGTTTAAAAGA ATTAATGGCGAAATAATTTCTACATCAATTAATCCCTTATCTTTGGGAAATCCAAGTATTCATTTAGGACAAGTCATTGG ATTGAGGCTGATTTCAAAAATTAGTGAGGTTCAAAAAAATAACACTTGTGTAATACTTGGCTGTGAATCAGTGGAATGTA TGAGACTTGAAGCAGGGGGAATGGCTAATATGGAATTAATAGAACAAGTTGTTCCAAATTCTTTTTCTACATCAGAATAC GATGTTAGTAAATTATTGGGAAGTAGTAGAGGTAATACCAGTCCTCTTTTTGAAAATTCTATTAAAATAGCTCTTCAAAT ATTTAATGGTTTGAATAACTAA
Upstream 100 bases:
>100_bases GGAAGTTACCTATTTATAATTATGAATCTATGACATGGGGACCTCCTGAGTCAGATCAATTAATTTCAAAAGATAATATT TTCTGGCGTAGACCCTAAAA
Downstream 100 bases:
>100_bases TAGATGCCTTGTGTAATATCTTCTCCTTCAACTGATAGCGGGAAAACTACATTATCTCTTTTGCTATCTTGTTGGGCGTT CTCAAAAGGTATAAAGATAC
Product: putative glucose 6-phosphate dehydrogenase effector OpcA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKPQLTLQTPLELPYQEISNYLNKLWISEDKDNSGANTFTLMVWQPAWLEQCLVQKGLVNGPITGNLSPEIIEVAKKFIL DQGLPIATSLNSEELLNLLKENLSNKEFDDFRGQFFESTISTLNPRRLITLAPTINKNSDIKTFVSAYCPLSDTPAMQPI CGDLVVIRGDSASISNKGLKIIDELSIDELPSWLWWNGSLDESPEIFEYFTDYGLRLIIDTALGSPQRCLKVLDQLNNSN KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDIDIDIAGDHMIQALFLISWISDKLGWSFLRVETDTESTKIEFKR INGEIISTSINPLSLGNPSIHLGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSTSEY DVSKLLGSSRGNTSPLFENSIKIALQIFNGLNN
Sequences:
>Translated_433_residues MKPQLTLQTPLELPYQEISNYLNKLWISEDKDNSGANTFTLMVWQPAWLEQCLVQKGLVNGPITGNLSPEIIEVAKKFIL DQGLPIATSLNSEELLNLLKENLSNKEFDDFRGQFFESTISTLNPRRLITLAPTINKNSDIKTFVSAYCPLSDTPAMQPI CGDLVVIRGDSASISNKGLKIIDELSIDELPSWLWWNGSLDESPEIFEYFTDYGLRLIIDTALGSPQRCLKVLDQLNNSN KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDIDIDIAGDHMIQALFLISWISDKLGWSFLRVETDTESTKIEFKR INGEIISTSINPLSLGNPSIHLGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSTSEY DVSKLLGSSRGNTSPLFENSIKIALQIFNGLNN >Mature_433_residues MKPQLTLQTPLELPYQEISNYLNKLWISEDKDNSGANTFTLMVWQPAWLEQCLVQKGLVNGPITGNLSPEIIEVAKKFIL DQGLPIATSLNSEELLNLLKENLSNKEFDDFRGQFFESTISTLNPRRLITLAPTINKNSDIKTFVSAYCPLSDTPAMQPI CGDLVVIRGDSASISNKGLKIIDELSIDELPSWLWWNGSLDESPEIFEYFTDYGLRLIIDTALGSPQRCLKVLDQLNNSN KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDIDIDIAGDHMIQALFLISWISDKLGWSFLRVETDTESTKIEFKR INGEIISTSINPLSLGNPSIHLGQVIGLRLISKISEVQKNNTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSTSEY DVSKLLGSSRGNTSPLFENSIKIALQIFNGLNN
Specific function: May be involved in the functional assembly of glucose 6- phosphate dehydrogenase [H]
COG id: COG3429
COG function: function code G; Glucose-6-P dehydrogenase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019297 - InterPro: IPR004555 - InterPro: IPR002477 [H]
Pfam domain/function: PF10128 OpcA_G6PD_assem; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 48523; Mature: 48523
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPQLTLQTPLELPYQEISNYLNKLWISEDKDNSGANTFTLMVWQPAWLEQCLVQKGLVN CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCC GPITGNLSPEIIEVAKKFILDQGLPIATSLNSEELLNLLKENLSNKEFDDFRGQFFESTI CCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH STLNPRRLITLAPTINKNSDIKTFVSAYCPLSDTPAMQPICGDLVVIRGDSASISNKGLK HHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH IIDELSIDELPSWLWWNGSLDESPEIFEYFTDYGLRLIIDTALGSPQRCLKVLDQLNNSN HHHHCCHHHCCCCEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDIDIDIAGDHMIQALFLISWISDKL CHHCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH GWSFLRVETDTESTKIEFKRINGEIISTSINPLSLGNPSIHLGQVIGLRLISKISEVQKN CCEEEEEECCCCCCEEEEEEECCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCC NTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSTSEYDVSKLLGSSRGNTSPLFENS CCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH IKIALQIFNGLNN HHHHHHHHHCCCC >Mature Secondary Structure MKPQLTLQTPLELPYQEISNYLNKLWISEDKDNSGANTFTLMVWQPAWLEQCLVQKGLVN CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCC GPITGNLSPEIIEVAKKFILDQGLPIATSLNSEELLNLLKENLSNKEFDDFRGQFFESTI CCCCCCCCHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH STLNPRRLITLAPTINKNSDIKTFVSAYCPLSDTPAMQPICGDLVVIRGDSASISNKGLK HHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCH IIDELSIDELPSWLWWNGSLDESPEIFEYFTDYGLRLIIDTALGSPQRCLKVLDQLNNSN HHHHCCHHHCCCCEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCC KAINDLNWVRLKNWRESLAMIFDPPSRRPILDHITDIDIDIAGDHMIQALFLISWISDKL CHHCCCHHHHHHHHHHHHHEEECCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHH GWSFLRVETDTESTKIEFKRINGEIISTSINPLSLGNPSIHLGQVIGLRLISKISEVQKN CCEEEEEECCCCCCEEEEEEECCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHCC NTCVILGCESVECMRLEAGGMANMELIEQVVPNSFSTSEYDVSKLLGSSRGNTSPLFENS CCEEEEECCCCEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCHHHH IKIALQIFNGLNN HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566707 [H]