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The map label for this gene is yjbQ [C]

Identifier: 123968085

GI number: 123968085

Start: 476518

End: 476973

Strand: Reverse

Name: yjbQ [C]

Synonym: A9601_05481

Alternate gene names: 123968085

Gene position: 476973-476518 (Counterclockwise)

Preceding gene: 123968087

Following gene: 123968084

Centisome position: 28.56

GC content: 30.04

Gene sequence:

>456_bases
ATGGAACAAATATTTTCAAAATTAAAATTCATAACCAATGGCGAGGGTTTTATTGATATCACATATGATTTAAATTTATG
TGTTGAAAAAAATAATTTTCATTCCGGAATTTTAAATTTAACTTCACTTCATACAAGTTGCAGTTTAACTATTAATGAGA
ACGCAGATCCCAATGTACTGAGGGACCTAAAAAAGTATATGCAATCTATAGTCCCCTATAATTCCTACTTAACCTTATCA
AAAAATAGAGAAGAAATATCCTATAAACATTATCAAGAAGGGGCTGACGATATGCCAGCACATATTAAAACATCCCTAAC
AAACACTTGTTTATCTTTGAGTTTTCAAGACGGTAAAATTATGCTTGGCACATGGCAAGCAGTTTATTTATGGGAACATC
GATTTGATCAAAAAGAAAGAATCATTAATGTACATATAATTGGTGAGAAAACGTAA

Upstream 100 bases:

>100_bases
ATGGAAATTAAATTTATCTTAAGATAAAAATTTTAATGTCTGCAGTAAAACATGTATCTTTATCCATAATAGGATATCGA
TTAATTAAGTTTTAACTTAT

Downstream 100 bases:

>100_bases
GATATTTATAATGTAATAAGTCAGATTTCTTATTTAATGGAACCCTACATTTTGCAAGATGAAGAATTGAATGAATTAGT
TGTCAAAATACCTGGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MEQIFSKLKFITNGEGFIDITYDLNLCVEKNNFHSGILNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYNSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIMLGTWQAVYLWEHRFDQKERIINVHIIGEKT

Sequences:

>Translated_151_residues
MEQIFSKLKFITNGEGFIDITYDLNLCVEKNNFHSGILNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYNSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIMLGTWQAVYLWEHRFDQKERIINVHIIGEKT
>Mature_151_residues
MEQIFSKLKFITNGEGFIDITYDLNLCVEKNNFHSGILNLTSLHTSCSLTINENADPNVLRDLKKYMQSIVPYNSYLTLS
KNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKIMLGTWQAVYLWEHRFDQKERIINVHIIGEKT

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=143, Percent_Identity=38.4615384615385, Blast_Score=96, Evalue=1e-21,
Organism=Drosophila melanogaster, GI221476589, Length=120, Percent_Identity=38.3333333333333, Blast_Score=93, Evalue=7e-20,
Organism=Drosophila melanogaster, GI221476594, Length=120, Percent_Identity=38.3333333333333, Blast_Score=93, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 17480; Mature: 17480

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIFSKLKFITNGEGFIDITYDLNLCVEKNNFHSGILNLTSLHTSCSLTINENADPNVL
CHHHHHHHHEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCHHHH
RDLKKYMQSIVPYNSYLTLSKNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKI
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCEE
MLGTWQAVYLWEHRFDQKERIINVHIIGEKT
EEEECEEEEEEECCCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MEQIFSKLKFITNGEGFIDITYDLNLCVEKNNFHSGILNLTSLHTSCSLTINENADPNVL
CHHHHHHHHEEECCCCEEEEEEEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCHHHH
RDLKKYMQSIVPYNSYLTLSKNREEISYKHYQEGADDMPAHIKTSLTNTCLSLSFQDGKI
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHEEEEEEECCCEE
MLGTWQAVYLWEHRFDQKERIINVHIIGEKT
EEEECEEEEEEECCCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]