Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is phhB
Identifier: 123968084
GI number: 123968084
Start: 476191
End: 476481
Strand: Reverse
Name: phhB
Synonym: A9601_05471
Alternate gene names: NA
Gene position: 476481-476191 (Counterclockwise)
Preceding gene: 123968085
Following gene: 123968083
Centisome position: 28.53
GC content: 30.24
Gene sequence:
>291_bases ATGGAACCCTACATTTTGCAAGATGAAGAATTGAATGAATTAGTTGTCAAAATACCTGGCTGGGAAATTAAATCTAAACA AATCCAAAGAGAATTTAACTTCGCTAATTTTATTGAAGCCTTTGCTTTTATGACTAAGGTTGCTTTAATCTGTGAAAAAT ATAATCATCATCCTAACTGGGAGAATGTTTATGCAAAAGTAATAATTAAATTAAATACACATGATCTGGGAGGTATTACG AATCTGGATCAAACATTAGCTTCGGAAATCAACAAAATTTTCGATCAATAA
Upstream 100 bases:
>100_bases GGAACATCGATTTGATCAAAAAGAAAGAATCATTAATGTACATATAATTGGTGAGAAAACGTAAGATATTTATAATGTAA TAAGTCAGATTTCTTATTTA
Downstream 100 bases:
>100_bases AAATATAAACTTGTTTTCAACTATTCAAAATGTCTAAAAATTTATTGCCAGTTACAATTATTAGTGGATTTTTAGGTTCT GGCAAAACTACACTACTAAA
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MEPYILQDEELNELVVKIPGWEIKSKQIQREFNFANFIEAFAFMTKVALICEKYNHHPNWENVYAKVIIKLNTHDLGGIT NLDQTLASEINKIFDQ
Sequences:
>Translated_96_residues MEPYILQDEELNELVVKIPGWEIKSKQIQREFNFANFIEAFAFMTKVALICEKYNHHPNWENVYAKVIIKLNTHDLGGIT NLDQTLASEINKIFDQ >Mature_96_residues MEPYILQDEELNELVVKIPGWEIKSKQIQREFNFANFIEAFAFMTKVALICEKYNHHPNWENVYAKVIIKLNTHDLGGIT NLDQTLASEINKIFDQ
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family
Homologues:
Organism=Homo sapiens, GI134133240, Length=91, Percent_Identity=48.3516483516484, Blast_Score=79, Evalue=9e-16, Organism=Homo sapiens, GI4557831, Length=96, Percent_Identity=41.6666666666667, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115533705, Length=94, Percent_Identity=45.7446808510638, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI45549100, Length=73, Percent_Identity=43.8356164383562, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PHS_PROM0 (A3PBL6)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090742.1 - ProteinModelPortal: A3PBL6 - SMR: A3PBL6 - STRING: A3PBL6 - GeneID: 4912349 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_05181 - eggNOG: COG2154 - HOGENOM: HBG705804 - OMA: IALICEK - ProtClustDB: PRK00823 - BioCyc: PMAR167546:P9301ORF_0531-MONOMER - HAMAP: MF_00434 - InterPro: IPR001533 - Gene3D: G3DSA:3.30.1360.20 - PANTHER: PTHR12599
Pfam domain/function: PF01329 Pterin_4a; SSF55248 Trans_pterinDh
EC number: =4.2.1.96
Molecular weight: Translated: 11254; Mature: 11254
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPYILQDEELNELVVKIPGWEIKSKQIQREFNFANFIEAFAFMTKVALICEKYNHHPNW CCCCCCCCCCCCHHEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ENVYAKVIIKLNTHDLGGITNLDQTLASEINKIFDQ HHEEHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MEPYILQDEELNELVVKIPGWEIKSKQIQREFNFANFIEAFAFMTKVALICEKYNHHPNW CCCCCCCCCCCCHHEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ENVYAKVIIKLNTHDLGGITNLDQTLASEINKIFDQ HHEEHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA