Definition | Prochlorococcus marinus str. AS9601, complete genome. |
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Accession | NC_008816 |
Length | 1,669,886 |
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The map label for this gene is 123967971
Identifier: 123967971
GI number: 123967971
Start: 375844
End: 376557
Strand: Reverse
Name: 123967971
Synonym: A9601_04341
Alternate gene names: NA
Gene position: 376557-375844 (Counterclockwise)
Preceding gene: 123967972
Following gene: 123967970
Centisome position: 22.55
GC content: 37.11
Gene sequence:
>714_bases ATGAGCGAAAAACTCTTCAGATTGAAATCACCTCTAATAAGTAATGGACTTATCTCTGCTTTAAGAAATCCAGATTCTGT AAGTGTAGAGGCAGTCAACTGCACGGTTGATCTTACGAATCTCTCAACACTTATAGATCAACTTATTCTCGAAAAAGTAA TTGGTGCAAACCTGGATGCAAGATTAGTTGAGTGTGTTCATACAACATTCAAATCTCTGCCTTCTCATATTCTTACTGAT ATGAGGATATGGCACTGGTTATGCGTAATAAGATATCCAAATATTCCGTGGCTTAGATGGAGAGGTAATATTCCGGTTGA TCCGGAAGATGGATTTACTGTTGGAACAGGAAAGAAACATGTTCCATCACTTAGATTTCTTGGGACATCATCAATAAATG GACATGGCAGAAATACTTTTTCGAGACTTTTTTTTGCTGCCGACAGGATGATGGAGAATGATCATTCTGACTATTCCCTG GTCAAAAAATTATTTACCAGTCAGGAACTTCATCTTGGTTTGAGTGATCGAGAATTTGGCCTGATCCCAAAAATCAATAG AATACTTACTGAAAAACTAGTTGAATTACCAGACAGCAAAGTAAGAATTGCGATAAGAAAACTAAATTCCCTTGGAGGTT CAATATGTCTTGATCTTTTAAGTGAAGAACAACTCCAGCAGTTAATTGATACTCAGAGTGAAGAGGTCGCATGA
Upstream 100 bases:
>100_bases TCCAGCAGGAAACAAAGATTCTGGAATTGGCCGAAATAATGGCAAGAGGGTGCAGTTTTGAATCAGATATTCCCGCAGAC CTAGAAAAAGAGGAGGTTGC
Downstream 100 bases:
>100_bases TTCATAAAAATGCAGTAGGGAAAAGTGATCCACACAGATTAAGTCCTGTAAGAGGGCCTTCATCAGAACTTGAGGCACAT GTAGATTCATGCAGTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSEKLFRLKSPLISNGLISALRNPDSVSVEAVNCTVDLTNLSTLIDQLILEKVIGANLDARLVECVHTTFKSLPSHILTD MRIWHWLCVIRYPNIPWLRWRGNIPVDPEDGFTVGTGKKHVPSLRFLGTSSINGHGRNTFSRLFFAADRMMENDHSDYSL VKKLFTSQELHLGLSDREFGLIPKINRILTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQQLIDTQSEEVA
Sequences:
>Translated_237_residues MSEKLFRLKSPLISNGLISALRNPDSVSVEAVNCTVDLTNLSTLIDQLILEKVIGANLDARLVECVHTTFKSLPSHILTD MRIWHWLCVIRYPNIPWLRWRGNIPVDPEDGFTVGTGKKHVPSLRFLGTSSINGHGRNTFSRLFFAADRMMENDHSDYSL VKKLFTSQELHLGLSDREFGLIPKINRILTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQQLIDTQSEEVA >Mature_236_residues SEKLFRLKSPLISNGLISALRNPDSVSVEAVNCTVDLTNLSTLIDQLILEKVIGANLDARLVECVHTTFKSLPSHILTDM RIWHWLCVIRYPNIPWLRWRGNIPVDPEDGFTVGTGKKHVPSLRFLGTSSINGHGRNTFSRLFFAADRMMENDHSDYSLV KKLFTSQELHLGLSDREFGLIPKINRILTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQQLIDTQSEEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26745; Mature: 26614
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLFRLKSPLISNGLISALRNPDSVSVEAVNCTVDLTNLSTLIDQLILEKVIGANLDA CCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCHH RLVECVHTTFKSLPSHILTDMRIWHWLCVIRYPNIPWLRWRGNIPVDPEDGFTVGTGKKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCC VPSLRFLGTSSINGHGRNTFSRLFFAADRMMENDHSDYSLVKKLFTSQELHLGLSDREFG CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCC LIPKINRILTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQQLIDTQSEEVA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure SEKLFRLKSPLISNGLISALRNPDSVSVEAVNCTVDLTNLSTLIDQLILEKVIGANLDA CCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCHH RLVECVHTTFKSLPSHILTDMRIWHWLCVIRYPNIPWLRWRGNIPVDPEDGFTVGTGKKH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCC VPSLRFLGTSSINGHGRNTFSRLFFAADRMMENDHSDYSLVKKLFTSQELHLGLSDREFG CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCCCCC LIPKINRILTEKLVELPDSKVRIAIRKLNSLGGSICLDLLSEEQLQQLIDTQSEEVA CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA