| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121610265
Identifier: 121610265
GI number: 121610265
Start: 3710071
End: 3710496
Strand: Direct
Name: 121610265
Synonym: Veis_3324
Alternate gene names: NA
Gene position: 3710071-3710496 (Clockwise)
Preceding gene: 121610264
Following gene: 121610266
Centisome position: 66.65
GC content: 72.54
Gene sequence:
>426_bases ATGCCATCGCGGCGCCAACTTCTGCCAGCCAGCGCATTGGCCTCCGGTCTCGGAGCCCTGGGTCTCACGACCACCACCGC ACAGGCCGCAACATCCGGCCCTGTCTACGCCTGCGTCGGCACCTACAGCGACGGCGGCAAGCCGTGGCGCGGCGGGCGCG GCCTCGGCGTGCACCAGTTCGTGCGGGACGGCGCGACCGGCGCGCTCAAGCCCATTCCCGGCGCGCCGCCCGCCGTGGCC AGCACGGGCAACGACGCCAAGCTGCGCAATCCCGCATCGCGCGCGCGCCACCCGAAGCTGCCGATGCTCTGTGCGGCCAA CGGGTTCGAGGCGGGCCCGGTCTTTCGCGTGGACAAGGGCGGCATCCAGTTCAGCGGCCAGTACGTGGCCGTCGGCAGCG CCGCCGCCATCGAGTTCTCGTCGTGA
Upstream 100 bases:
>100_bases GGCCTCTCGGCCAAAAGCCCGGCGCTGGACAACTACACGCCCGCGACCTGGCCGTTCTTTTGGAACGCGAAGATCAAGTA AGGCCGCAAGGAAGTCCGCC
Downstream 100 bases:
>100_bases TGAAGATGAAAAGTGCCTCGCTTCGCTACATCGCCGCGCGCGCGGGCGGCATGCTCGTCGTGCTGGCCATCGTGGCGGTG CTGGTCTTTGTGCTCACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MPSRRQLLPASALASGLGALGLTTTTAQAATSGPVYACVGTYSDGGKPWRGGRGLGVHQFVRDGATGALKPIPGAPPAVA STGNDAKLRNPASRARHPKLPMLCAANGFEAGPVFRVDKGGIQFSGQYVAVGSAAAIEFSS
Sequences:
>Translated_141_residues MPSRRQLLPASALASGLGALGLTTTTAQAATSGPVYACVGTYSDGGKPWRGGRGLGVHQFVRDGATGALKPIPGAPPAVA STGNDAKLRNPASRARHPKLPMLCAANGFEAGPVFRVDKGGIQFSGQYVAVGSAAAIEFSS >Mature_140_residues PSRRQLLPASALASGLGALGLTTTTAQAATSGPVYACVGTYSDGGKPWRGGRGLGVHQFVRDGATGALKPIPGAPPAVAS TGNDAKLRNPASRARHPKLPMLCAANGFEAGPVFRVDKGGIQFSGQYVAVGSAAAIEFSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14162; Mature: 14031
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRRQLLPASALASGLGALGLTTTTAQAATSGPVYACVGTYSDGGKPWRGGRGLGVHQF CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH VRDGATGALKPIPGAPPAVASTGNDAKLRNPASRARHPKLPMLCAANGFEAGPVFRVDKG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECC GIQFSGQYVAVGSAAAIEFSS CEEECCCEEEECCEEEEEECC >Mature Secondary Structure PSRRQLLPASALASGLGALGLTTTTAQAATSGPVYACVGTYSDGGKPWRGGRGLGVHQF CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH VRDGATGALKPIPGAPPAVASTGNDAKLRNPASRARHPKLPMLCAANGFEAGPVFRVDKG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECC GIQFSGQYVAVGSAAAIEFSS CEEECCCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA