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The map label for this gene is yliB [C]

Identifier: 121610264

GI number: 121610264

Start: 3708468

End: 3710051

Strand: Direct

Name: yliB [C]

Synonym: Veis_3323

Alternate gene names: 121610264

Gene position: 3708468-3710051 (Clockwise)

Preceding gene: 121610262

Following gene: 121610265

Centisome position: 66.62

GC content: 67.36

Gene sequence:

>1584_bases
ATGCCCCATGCCGCCCACGCCGGTCTCGTCCAGCGCCTGTCCAAGCTGTCCAAGCGCAGCCTGCTGGGTGCCTGCCTGCT
CGCGATGCTGTGCGCCGTGCTGCCGTATCGGCAAGCGCATGCCCAGGGGCCGCGCAACTTCGCGACGCTCGCGATGGTGG
CCGAGCCGCAGACGCTCGACCCGATGGCATCGACCGCCGACCTGGTCGGAACCATCATGCAGCATGTGTACGAGACGCTC
TACACCTTCGACGCCAAGTGGAACGTGGTGCCGATGCTGGCCGAGACGATGCCGAAGATCTCTGCGGACGGCAAGACCTA
CGCCATCACATTGCGCCGCGGCGTGATGCTGCACAACGGCCGCGAGCTCACCGCCGACGATGTGGTGGCGAGCCTGCAGC
GCTGGATGGATCAGTCGCCGCGCGGCAAGGCCATGGGCAAGGAAATCGAGACGCTCGAGGCCGAGGGTCCGCTGGGCGTG
AAAATCGTGCTGAAGGCGCCGTATGCGTCGCTGCTCTCGCAGCTTGCGCTCCAGAGCGGCATGGCCGCGATCATGGCCAA
GGACTCCATCGCCTCGCCGCTGAAGGACTTCGTCGGCACCGGCCCCTACAAGTTCAAGGAGCGCCGGCCCGATCAGTTCG
TGCTGCTCACCCGCTTCGACAAGTACGCGGCGCGCAAGGAACCCGCGAGCGGCTACGGCGGCAAGCGCGAAGCGGCCATC
GAGGAACTGCGCTTCGTGCCCGTGCCCAACGCCGGCACGCGCGTCGAAGGCGCGCTCGCGGGCCAGTACGACTTTGCCGA
CCTGCTGCCGGTCGAAGCGCTGCCGCGCCTGGAGAAGTCGGGCGGCAAGACCGTGCCGATCATGACGCCGTCGTTCGGCT
TCCCGTACCTCGTGCTCAACACCAAGGAAGGCGTGGCCGCGAGCCAGCCGGTGCGCCAGGCGATCCAGACCGCGCTCGGC
GCAGGCGAGATGCTCGCCGCCGGCTTCGGCGACACGCGCTTCTTCGTGGCCGAGGCCAACCACTTCCCCAAGGGCTCGCC
GTTCTATTCGACCGCCGGCGGCGACCAGTACAACCAGCGCAACGCCGCCAAGGCCAAGGAGTTGGCGGCCAAGGCCGGCT
ACAAGGGCGATCCGATCCGCGTGCTCACCAGCCGCCAGTACGACTTCCACTACAACATGTCGCTGCTGATGGCCGAGCAG
TTCAAGCGCGCCGGCTTCAAGGTCGACCTGAACGTGGTCGACTGGGCCACGCTGGTGCAGCGCCGCAACGATGCGAAGCT
CTGGGACATCTACGTCACCCACTCGGGCCAGTTCCCCGAGCCGATGCTCTCGCCGCCGCAGCTCGGTGACGGCGCGCCCG
GCTGGTGGGACACGCCCGCCAAGAAGGCGGCGCTGCAGGCCTTCAATGTCGAGAGCGACCCGGCCAAGCGCGGCGCGCTG
TGGGGCAAGGTGCAGCAGGTCGTCTACGACGAGGTGCCGTACATCAACGTGGGCAAGTTCAACGGCCTCTCGGCCAAAAG
CCCGGCGCTGGACAACTACACGCCCGCGACCTGGCCGTTCTTTTGGAACGCGAAGATCAAGTAA

Upstream 100 bases:

>100_bases
GGGTTTACACGGATGATTCAGCGGGAATGCTGCGTCAAAGTCCGGGCAGAAAAGAAAATTTATTTCACGCACCCCGCTCG
CCCTGATGAAGGAGTTCCCC

Downstream 100 bases:

>100_bases
GGCCGCAAGGAAGTCCGCCATGCCATCGCGGCGCCAACTTCTGCCAGCCAGCGCATTGGCCTCCGGTCTCGGAGCCCTGG
GTCTCACGACCACCACCGCA

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MPHAAHAGLVQRLSKLSKRSLLGACLLAMLCAVLPYRQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQHVYETL
YTFDAKWNVVPMLAETMPKISADGKTYAITLRRGVMLHNGRELTADDVVASLQRWMDQSPRGKAMGKEIETLEAEGPLGV
KIVLKAPYASLLSQLALQSGMAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYAARKEPASGYGGKREAAI
EELRFVPVPNAGTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVAASQPVRQAIQTALG
AGEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGGDQYNQRNAAKAKELAAKAGYKGDPIRVLTSRQYDFHYNMSLLMAEQ
FKRAGFKVDLNVVDWATLVQRRNDAKLWDIYVTHSGQFPEPMLSPPQLGDGAPGWWDTPAKKAALQAFNVESDPAKRGAL
WGKVQQVVYDEVPYINVGKFNGLSAKSPALDNYTPATWPFFWNAKIK

Sequences:

>Translated_527_residues
MPHAAHAGLVQRLSKLSKRSLLGACLLAMLCAVLPYRQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQHVYETL
YTFDAKWNVVPMLAETMPKISADGKTYAITLRRGVMLHNGRELTADDVVASLQRWMDQSPRGKAMGKEIETLEAEGPLGV
KIVLKAPYASLLSQLALQSGMAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYAARKEPASGYGGKREAAI
EELRFVPVPNAGTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVAASQPVRQAIQTALG
AGEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGGDQYNQRNAAKAKELAAKAGYKGDPIRVLTSRQYDFHYNMSLLMAEQ
FKRAGFKVDLNVVDWATLVQRRNDAKLWDIYVTHSGQFPEPMLSPPQLGDGAPGWWDTPAKKAALQAFNVESDPAKRGAL
WGKVQQVVYDEVPYINVGKFNGLSAKSPALDNYTPATWPFFWNAKIK
>Mature_526_residues
PHAAHAGLVQRLSKLSKRSLLGACLLAMLCAVLPYRQAHAQGPRNFATLAMVAEPQTLDPMASTADLVGTIMQHVYETLY
TFDAKWNVVPMLAETMPKISADGKTYAITLRRGVMLHNGRELTADDVVASLQRWMDQSPRGKAMGKEIETLEAEGPLGVK
IVLKAPYASLLSQLALQSGMAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYAARKEPASGYGGKREAAIE
ELRFVPVPNAGTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLNTKEGVAASQPVRQAIQTALGA
GEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGGDQYNQRNAAKAKELAAKAGYKGDPIRVLTSRQYDFHYNMSLLMAEQF
KRAGFKVDLNVVDWATLVQRRNDAKLWDIYVTHSGQFPEPMLSPPQLGDGAPGWWDTPAKKAALQAFNVESDPAKRGALW
GKVQQVVYDEVPYINVGKFNGLSAKSPALDNYTPATWPFFWNAKIK

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=477, Percent_Identity=23.4800838574423, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1789887, Length=529, Percent_Identity=23.6294896030246, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789966, Length=445, Percent_Identity=24.0449438202247, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI87081878, Length=503, Percent_Identity=23.0616302186879, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1787762, Length=314, Percent_Identity=26.4331210191083, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57680; Mature: 57549

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHAAHAGLVQRLSKLSKRSLLGACLLAMLCAVLPYRQAHAQGPRNFATLAMVAEPQTLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCC
PMASTADLVGTIMQHVYETLYTFDAKWNVVPMLAETMPKISADGKTYAITLRRGVMLHNG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCEEEECC
RELTADDVVASLQRWMDQSPRGKAMGKEIETLEAEGPLGVKIVLKAPYASLLSQLALQSG
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHC
MAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYAARKEPASGYGGKREAAI
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCHHHHH
EELRFVPVPNAGTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLN
HHHEEEECCCCCCCCCCEECCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEE
TKEGVAASQPVRQAIQTALGAGEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGGDQYNQR
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCHH
NAAKAKELAAKAGYKGDPIRVLTSRQYDFHYNMSLLMAEQFKRAGFKVDLNVVDWATLVQ
HHHHHHHHHHHCCCCCCCEEEEECCCCCEEECHHHHHHHHHHHCCCEEEEEHHHHHHHHH
RRNDAKLWDIYVTHSGQFPEPMLSPPQLGDGAPGWWDTPAKKAALQAFNVESDPAKRGAL
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
WGKVQQVVYDEVPYINVGKFNGLSAKSPALDNYTPATWPFFWNAKIK
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure 
PHAAHAGLVQRLSKLSKRSLLGACLLAMLCAVLPYRQAHAQGPRNFATLAMVAEPQTLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEECCCCCC
PMASTADLVGTIMQHVYETLYTFDAKWNVVPMLAETMPKISADGKTYAITLRRGVMLHNG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCEEEECC
RELTADDVVASLQRWMDQSPRGKAMGKEIETLEAEGPLGVKIVLKAPYASLLSQLALQSG
CCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHC
MAAIMAKDSIASPLKDFVGTGPYKFKERRPDQFVLLTRFDKYAARKEPASGYGGKREAAI
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEEEEHHHHHHCCCCCCCCCCCHHHHH
EELRFVPVPNAGTRVEGALAGQYDFADLLPVEALPRLEKSGGKTVPIMTPSFGFPYLVLN
HHHEEEECCCCCCCCCCEECCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEE
TKEGVAASQPVRQAIQTALGAGEMLAAGFGDTRFFVAEANHFPKGSPFYSTAGGDQYNQR
CCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCHH
NAAKAKELAAKAGYKGDPIRVLTSRQYDFHYNMSLLMAEQFKRAGFKVDLNVVDWATLVQ
HHHHHHHHHHHCCCCCCCEEEEECCCCCEEECHHHHHHHHHHHCCCEEEEEHHHHHHHHH
RRNDAKLWDIYVTHSGQFPEPMLSPPQLGDGAPGWWDTPAKKAALQAFNVESDPAKRGAL
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHH
WGKVQQVVYDEVPYINVGKFNGLSAKSPALDNYTPATWPFFWNAKIK
HHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA