Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is drp35 [H]
Identifier: 121610090
GI number: 121610090
Start: 3499289
End: 3500200
Strand: Direct
Name: drp35 [H]
Synonym: Veis_3148
Alternate gene names: 121610090
Gene position: 3499289-3500200 (Clockwise)
Preceding gene: 121610082
Following gene: 121610113
Centisome position: 62.86
GC content: 68.53
Gene sequence:
>912_bases ATGGACATCATCGCGACAGGACTGGAATTTCCCGAAGGGCCGATCGCACTGGCCGATGGCTCGGTGCTGCTGGTCGAACT GGCGCGTTCGACCCTGGTTCGCATCGAGCCTGACGGGCGCAAGCAGGAACTGGCCCATGCGCCGGGCGCATTCAATGGCG CCGCCATCGGCCCCGACGGCCGGGTCTACCTGTGCAACAACGGCGGCTTCGGCTGGGTGCGTGAGCGCGGCACATTGCGG CCCCACCTGCAGGCGCCCGACTATGCCGGCGGCGGCATCGATGTGTTCGACTTCGCCACGGGCCGGGTCGAGCGGCTCTA CGATCGATGCGGCGGGCAGCCGCTCAAAGGCCCGAACGACCTGGTGTTCGACGCCAGCGGCGGATTCTGGTTCAGCGATC TGGGCAAGCGCAGGGCGCGCGACATGGACCGTGGTTTCGTGTACTGGGCGCGCGCCGATGGCAGCGAGATCCGCGAGGTC ATCGGGCCGCTGCTCACGCCCAATGGCATCGGCCTGTCGCCGGACGGCAAGACGCTGTATGTGGCAGAGACGGAGACCGC GCGCCTGTGGGCCTGGGAGATCACCGGGCCGGGCCAGGTGCGCAAGCGCCCCTGGCCTTCACCGGCGGGCGGAACCCTGA TCGCCGGCGTCGGAGGCCATACCCGGTTCGATAGCCTGGCGCTGAGCGCCAGCGGCAATATCTGCGTGGCCGCTTTGCAC GCCGGGGCCGTCATCGAGATTGCCCCCACGGGCGCGCGCGTGCAAAGCCACCCGATGCCGGATCTGGGAGTGACCAACAT CTGCTTTGGCGGCGCCGACATGCGCACGGCCTATGTCACCTTGTCGCACGAGGGACGCCTGGGGGCCATGCAGTGGCATG AGCCGGGGCTGCGGCTGAACTTCCAGCAATGA
Upstream 100 bases:
>100_bases GGATGACGGCAGGCGGTGGGCGATGGCCTGCATTATCCTCGGCGGCGTGCGCTGCGACGAGCCGCACGACATCCCGACGA ACGAAACCGGAGACGAGGAC
Downstream 100 bases:
>100_bases CGCGGGCCACGGCCACCGGCGGCTGCCGGCGTTGCCGTGAATGCCATGCATATGTCGGGCCGCTGCGCGAAAAGATCCGG GACCGTGGTGCGCGGGGTGG
Product: SMP-30/gluconolaconase/LRE domain-containing protein
Products: D-gluconate
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MDIIATGLEFPEGPIALADGSVLLVELARSTLVRIEPDGRKQELAHAPGAFNGAAIGPDGRVYLCNNGGFGWVRERGTLR PHLQAPDYAGGGIDVFDFATGRVERLYDRCGGQPLKGPNDLVFDASGGFWFSDLGKRRARDMDRGFVYWARADGSEIREV IGPLLTPNGIGLSPDGKTLYVAETETARLWAWEITGPGQVRKRPWPSPAGGTLIAGVGGHTRFDSLALSASGNICVAALH AGAVIEIAPTGARVQSHPMPDLGVTNICFGGADMRTAYVTLSHEGRLGAMQWHEPGLRLNFQQ
Sequences:
>Translated_303_residues MDIIATGLEFPEGPIALADGSVLLVELARSTLVRIEPDGRKQELAHAPGAFNGAAIGPDGRVYLCNNGGFGWVRERGTLR PHLQAPDYAGGGIDVFDFATGRVERLYDRCGGQPLKGPNDLVFDASGGFWFSDLGKRRARDMDRGFVYWARADGSEIREV IGPLLTPNGIGLSPDGKTLYVAETETARLWAWEITGPGQVRKRPWPSPAGGTLIAGVGGHTRFDSLALSASGNICVAALH AGAVIEIAPTGARVQSHPMPDLGVTNICFGGADMRTAYVTLSHEGRLGAMQWHEPGLRLNFQQ >Mature_303_residues MDIIATGLEFPEGPIALADGSVLLVELARSTLVRIEPDGRKQELAHAPGAFNGAAIGPDGRVYLCNNGGFGWVRERGTLR PHLQAPDYAGGGIDVFDFATGRVERLYDRCGGQPLKGPNDLVFDASGGFWFSDLGKRRARDMDRGFVYWARADGSEIREV IGPLLTPNGIGLSPDGKTLYVAETETARLWAWEITGPGQVRKRPWPSPAGGTLIAGVGGHTRFDSLALSASGNICVAALH AGAVIEIAPTGARVQSHPMPDLGVTNICFGGADMRTAYVTLSHEGRLGAMQWHEPGLRLNFQQ
Specific function: Exhibits lactonase activity. Acts in cells with perturbed membrane integrity and is possibly related to the membrane homeostasis [H]
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SMP-30/CGR1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR013658 [H]
Pfam domain/function: PF08450 SGL [H]
EC number: 3.1.1.17
Molecular weight: Translated: 32370; Mature: 32370
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIIATGLEFPEGPIALADGSVLLVELARSTLVRIEPDGRKQELAHAPGAFNGAAIGPDG CCEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCEECCCC RVYLCNNGGFGWVRERGTLRPHLQAPDYAGGGIDVFDFATGRVERLYDRCGGQPLKGPND EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCC LVFDASGGFWFSDLGKRRARDMDRGFVYWARADGSEIREVIGPLLTPNGIGLSPDGKTLY EEEECCCCEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEE VAETETARLWAWEITGPGQVRKRPWPSPAGGTLIAGVGGHTRFDSLALSASGNICVAALH EEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEC AGAVIEIAPTGARVQSHPMPDLGVTNICFGGADMRTAYVTLSHEGRLGAMQWHEPGLRLN CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCEEECCCCCEEE FQQ ECC >Mature Secondary Structure MDIIATGLEFPEGPIALADGSVLLVELARSTLVRIEPDGRKQELAHAPGAFNGAAIGPDG CCEEECCCCCCCCCEEEECCCEEEEEECCCEEEEECCCCCHHHHHCCCCCCCCCEECCCC RVYLCNNGGFGWVRERGTLRPHLQAPDYAGGGIDVFDFATGRVERLYDRCGGQPLKGPND EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCC LVFDASGGFWFSDLGKRRARDMDRGFVYWARADGSEIREVIGPLLTPNGIGLSPDGKTLY EEEECCCCEEHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEE VAETETARLWAWEITGPGQVRKRPWPSPAGGTLIAGVGGHTRFDSLALSASGNICVAALH EEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCEEEEEEC AGAVIEIAPTGARVQSHPMPDLGVTNICFGGADMRTAYVTLSHEGRLGAMQWHEPGLRLN CCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCEEECCCCCEEE FQQ ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glucono-1,5-lactone; H2O
Specific reaction: D-glucono-1,5-lactone + H2O = D-gluconate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA