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The map label for this gene is ycdK [C]

Identifier: 121610082

GI number: 121610082

Start: 3491718

End: 3492182

Strand: Direct

Name: ycdK [C]

Synonym: Veis_3140

Alternate gene names: 121610082

Gene position: 3491718-3492182 (Clockwise)

Preceding gene: 121610081

Following gene: 121610090

Centisome position: 62.72

GC content: 68.17

Gene sequence:

>465_bases
ATGAGCATGGGCAAGCCAATGGCCCACTACGCCGCCGCCAGGCGTGTGGGCGACTTCGTATTCACGAGCGGCGTGGTGGC
GGTCGATCCGTCCAGGCGCCGCGCAGTGGCCGATTACGACGACCTGCCCGAGGCCGCCCGCACGGCGCTGCAAGGCGTGG
GCTACGTGACCGGCCAGATGTCGGTCGACAGGTTCGAGGCCGCCATCGTGGCCCAAAGCTGGTTCGTGCTCGAACGCATC
CGCCAGATCGCGGTCGAGCATGGCGGCACGATGGACGATGTGGTGAAACTGGTGCAGTACTTTCGCCACCTGCCGCACTA
CGCCTTCTACAACCGCGTGCGCGGCCTGTTCTATCCGGGCGCGCCGCCGGTCAGCACGGTGCTGGAGGTAGCGCGCCTGC
TGCCGGGCGACGAGGTGCTGCTGGAGGTCGAGGCCACGCTGTACCTGCCCGAACGCGCCGTCTGA

Upstream 100 bases:

>100_bases
ACCTGGTGCTGCTGGAGGCCAGCGCCGAGCATGAGCTGATCGGTGCGCGCGGGCGCCGGCGCAGCGTGATTCGCGCCGGG
CAGATTCTGGAGCCAACACC

Downstream 100 bases:

>100_bases
TGCCGGCGCATTGGCGCTGCCCCGCCGTGCCAATGTGCATGAGACCCACGGCGCGGGCTTGCCCCTTTGGGGCAAGGAGG
GGCAAGCCCAAGCGCATCAG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: Endoribonuclease L-PSP Family Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSMGKPMAHYAAARRVGDFVFTSGVVAVDPSRRRAVADYDDLPEAARTALQGVGYVTGQMSVDRFEAAIVAQSWFVLERI
RQIAVEHGGTMDDVVKLVQYFRHLPHYAFYNRVRGLFYPGAPPVSTVLEVARLLPGDEVLLEVEATLYLPERAV

Sequences:

>Translated_154_residues
MSMGKPMAHYAAARRVGDFVFTSGVVAVDPSRRRAVADYDDLPEAARTALQGVGYVTGQMSVDRFEAAIVAQSWFVLERI
RQIAVEHGGTMDDVVKLVQYFRHLPHYAFYNRVRGLFYPGAPPVSTVLEVARLLPGDEVLLEVEATLYLPERAV
>Mature_153_residues
SMGKPMAHYAAARRVGDFVFTSGVVAVDPSRRRAVADYDDLPEAARTALQGVGYVTGQMSVDRFEAAIVAQSWFVLERIR
QIAVEHGGTMDDVVKLVQYFRHLPHYAFYNRVRGLFYPGAPPVSTVLEVARLLPGDEVLLEVEATLYLPERAV

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17113; Mature: 16982

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMGKPMAHYAAARRVGDFVFTSGVVAVDPSRRRAVADYDDLPEAARTALQGVGYVTGQM
CCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHCCCC
SVDRFEAAIVAQSWFVLERIRQIAVEHGGTMDDVVKLVQYFRHLPHYAFYNRVRGLFYPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
APPVSTVLEVARLLPGDEVLLEVEATLYLPERAV
CCCHHHHHHHHHHCCCCCEEEEEHHEEECCCCCC
>Mature Secondary Structure 
SMGKPMAHYAAARRVGDFVFTSGVVAVDPSRRRAVADYDDLPEAARTALQGVGYVTGQM
CCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHCCCC
SVDRFEAAIVAQSWFVLERIRQIAVEHGGTMDDVVKLVQYFRHLPHYAFYNRVRGLFYPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
APPVSTVLEVARLLPGDEVLLEVEATLYLPERAV
CCCHHHHHHHHHHCCCCCEEEEEHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA