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The map label for this gene is ttdA [C]

Identifier: 121610001

GI number: 121610001

Start: 3410163

End: 3411035

Strand: Direct

Name: ttdA [C]

Synonym: Veis_3057

Alternate gene names: 121610001

Gene position: 3410163-3411035 (Clockwise)

Preceding gene: 121610000

Following gene: 121610002

Centisome position: 61.26

GC content: 64.6

Gene sequence:

>873_bases
ATGGCCATCGACAGTGCAACCCTGCAGCGTGTGACAGCGCAGCTCTATGAGCGCTCCCTGAAGAAAATCCCCGACGACAC
GCGCGCTGCACTTGCGCGCGCTGAAACTGCCGAGACCGACGTCACCGGAAAGCGCATGCTCAAGATCATGCTGCAGAGCG
CGGACGCGGCGCAGCAGGACAATGAATTGGTCTGCTCGGACGTCGGCATTCCGGTCTACAGCATCAAGATCGGCACACGG
GTGCAGTTCGAGGGGCCGGTGCGCGCAGCGATCACCCGGGGCTTCGCAGAGTTGGTGCAGCGCAGCGATCCGCCGATCCT
CAAGATGGTGACCAACCCGCTGACCCATGAACGCAGCCATGCCGGCAAGGACATGCCGCTGCTGAGTTTCGACGTGATCG
ACGATGCGGACTATGTCGAGATCGTCTGCGCCCCCAAGGCCATGGGCACTGGTCGGTGGGAAGCGATCGATGTCTTCGTC
TACCCGACGCTGGAGCAGATCGAGAGGTTCATACTCGATACCGTGCTGCGCGCAGGCTCGCAACCTTGCCTGCCGATCGT
GATCGGCGTGGGCATAGGCGGCACTTTCGACCATGCGGCGCGGCTGGCCAAGGAGTCGGTGCTGCGCCCTTTCGGCCGCA
CCAACCCCGAGCCGATTTTGGCGGCCATGGAGCAGCGCCTGCTCGACGCCGTCAATGCCATGGGCTTCGGCCCGATGGGC
ACCGGGGGCGACGCCAGTGCGATGGCAGTCCACATCGACTACGCCGCCAGCCACGGTTTCGTGCCGGTCGCCGTGTGCCT
GAACTGCTGGATCAACCGCCGCACCGCCGCCCGCATCCACAACGACGGCCGCGTCGAGGATCTCCACTGGTAA

Upstream 100 bases:

>100_bases
CTGCGACTTTTCTGCTGCTGAAAACTGCCAAGAATGGGCTTGAACACTGGCCGGCGACGGCGCATCGTATGGCCATCAAA
ACAAGCGGACCTGCGCCACC

Downstream 100 bases:

>100_bases
GCCGCCATGTTCCATCCGCTGGTACTTCCCCTGTCGCGCGACAAAGTGCGCGCACTCGCCGTCGGCGACATGGTGACGCT
CGATGGTGAAATCACCGTCA

Product: tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAIDSATLQRVTAQLYERSLKKIPDDTRAALARAETAETDVTGKRMLKIMLQSADAAQQDNELVCSDVGIPVYSIKIGTR
VQFEGPVRAAITRGFAELVQRSDPPILKMVTNPLTHERSHAGKDMPLLSFDVIDDADYVEIVCAPKAMGTGRWEAIDVFV
YPTLEQIERFILDTVLRAGSQPCLPIVIGVGIGGTFDHAARLAKESVLRPFGRTNPEPILAAMEQRLLDAVNAMGFGPMG
TGGDASAMAVHIDYAASHGFVPVAVCLNCWINRRTAARIHNDGRVEDLHW

Sequences:

>Translated_290_residues
MAIDSATLQRVTAQLYERSLKKIPDDTRAALARAETAETDVTGKRMLKIMLQSADAAQQDNELVCSDVGIPVYSIKIGTR
VQFEGPVRAAITRGFAELVQRSDPPILKMVTNPLTHERSHAGKDMPLLSFDVIDDADYVEIVCAPKAMGTGRWEAIDVFV
YPTLEQIERFILDTVLRAGSQPCLPIVIGVGIGGTFDHAARLAKESVLRPFGRTNPEPILAAMEQRLLDAVNAMGFGPMG
TGGDASAMAVHIDYAASHGFVPVAVCLNCWINRRTAARIHNDGRVEDLHW
>Mature_289_residues
AIDSATLQRVTAQLYERSLKKIPDDTRAALARAETAETDVTGKRMLKIMLQSADAAQQDNELVCSDVGIPVYSIKIGTRV
QFEGPVRAAITRGFAELVQRSDPPILKMVTNPLTHERSHAGKDMPLLSFDVIDDADYVEIVCAPKAMGTGRWEAIDVFVY
PTLEQIERFILDTVLRAGSQPCLPIVIGVGIGGTFDHAARLAKESVLRPFGRTNPEPILAAMEQRLLDAVNAMGFGPMGT
GGDASAMAVHIDYAASHGFVPVAVCLNCWINRRTAARIHNDGRVEDLHW

Specific function: Unknown

COG id: COG1951

COG function: function code C; Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789442, Length=297, Percent_Identity=27.9461279461279, Blast_Score=118, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004646 [H]

Pfam domain/function: PF05681 Fumerase [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 31621; Mature: 31490

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDSATLQRVTAQLYERSLKKIPDDTRAALARAETAETDVTGKRMLKIMLQSADAAQQD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
NELVCSDVGIPVYSIKIGTRVQFEGPVRAAITRGFAELVQRSDPPILKMVTNPLTHERSH
CCEEEECCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHH
AGKDMPLLSFDVIDDADYVEIVCAPKAMGTGRWEAIDVFVYPTLEQIERFILDTVLRAGS
CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC
QPCLPIVIGVGIGGTFDHAARLAKESVLRPFGRTNPEPILAAMEQRLLDAVNAMGFGPMG
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TGGDASAMAVHIDYAASHGFVPVAVCLNCWINRRTAARIHNDGRVEDLHW
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIDSATLQRVTAQLYERSLKKIPDDTRAALARAETAETDVTGKRMLKIMLQSADAAQQD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
NELVCSDVGIPVYSIKIGTRVQFEGPVRAAITRGFAELVQRSDPPILKMVTNPLTHERSH
CCEEEECCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHCCCCCEEHHHCCCHHHHHHH
AGKDMPLLSFDVIDDADYVEIVCAPKAMGTGRWEAIDVFVYPTLEQIERFILDTVLRAGS
CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC
QPCLPIVIGVGIGGTFDHAARLAKESVLRPFGRTNPEPILAAMEQRLLDAVNAMGFGPMG
CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
TGGDASAMAVHIDYAASHGFVPVAVCLNCWINRRTAARIHNDGRVEDLHW
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]