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The map label for this gene is ttdB [C]

Identifier: 121610002

GI number: 121610002

Start: 3411042

End: 3411659

Strand: Direct

Name: ttdB [C]

Synonym: Veis_3058

Alternate gene names: 121610002

Gene position: 3411042-3411659 (Clockwise)

Preceding gene: 121610001

Following gene: 121610003

Centisome position: 61.28

GC content: 66.5

Gene sequence:

>618_bases
ATGTTCCATCCGCTGGTACTTCCCCTGTCGCGCGACAAAGTGCGCGCACTCGCCGTCGGCGACATGGTGACGCTCGATGG
TGAAATCACCGTCAGCATCGGCCTGCAAACGCATCAGCGCATGGTGCAGGCAGTGGGCGATGGCCAGGCGCTGCCGGTCG
ATCTGCGCGCGGGCGCTTTTTTTCACCTCAGCACCTGTGTTCGGGACACCGGGGACGGGCCGCAGCCGCTGTACACGAAC
CCGAGTACCAGCACGCGCTACAACGCCTGGATGCCGTCGCTGGTGCGCGGCCTCGACCTGCGCTTGACCGGCGGCAAGGG
GGGGCTCGACGCGGCCAGCGTGCAGGCGCTGCGCGATACCGGCTGCGTCTACCTGTCCTTTCTTGGCGGCGGGGCGCCGT
TGTTGTCGCGCGGATTGCGCGGCCTGGTGTCTTCCCACTGGAACGAATACATCTCGCAATTTCGCTTGCTGACGTTGCGT
GTGGCCGCGTTCGGTCCCGCCACGGTGGCCATCGATGCGCACGGCAACAGCCTCTACGAGCAACTGCGCGGGCAGGCACA
AGCCCGCATGCCGCAATTGCTGCAGCGCCTGGACGCGGCCCGCAAGGCATCTCGATGA

Upstream 100 bases:

>100_bases
CGTGCCGGTCGCCGTGTGCCTGAACTGCTGGATCAACCGCCGCACCGCCGCCCGCATCCACAACGACGGCCGCGTCGAGG
ATCTCCACTGGTAAGCCGCC

Downstream 100 bases:

>100_bases
CAACACCCGGGAGACTGAAAAAAATGAACAGGCGACATTGGCTCGGCGCAACCCTGTGCGCCGTCGGCACGGCGGCGAGT
CTCGTGCCGGTGACTGCACT

Product: fumarate hydratase class I subunit beta

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MFHPLVLPLSRDKVRALAVGDMVTLDGEITVSIGLQTHQRMVQAVGDGQALPVDLRAGAFFHLSTCVRDTGDGPQPLYTN
PSTSTRYNAWMPSLVRGLDLRLTGGKGGLDAASVQALRDTGCVYLSFLGGGAPLLSRGLRGLVSSHWNEYISQFRLLTLR
VAAFGPATVAIDAHGNSLYEQLRGQAQARMPQLLQRLDAARKASR

Sequences:

>Translated_205_residues
MFHPLVLPLSRDKVRALAVGDMVTLDGEITVSIGLQTHQRMVQAVGDGQALPVDLRAGAFFHLSTCVRDTGDGPQPLYTN
PSTSTRYNAWMPSLVRGLDLRLTGGKGGLDAASVQALRDTGCVYLSFLGGGAPLLSRGLRGLVSSHWNEYISQFRLLTLR
VAAFGPATVAIDAHGNSLYEQLRGQAQARMPQLLQRLDAARKASR
>Mature_205_residues
MFHPLVLPLSRDKVRALAVGDMVTLDGEITVSIGLQTHQRMVQAVGDGQALPVDLRAGAFFHLSTCVRDTGDGPQPLYTN
PSTSTRYNAWMPSLVRGLDLRLTGGKGGLDAASVQALRDTGCVYLSFLGGGAPLLSRGLRGLVSSHWNEYISQFRLLTLR
VAAFGPATVAIDAHGNSLYEQLRGQAQARMPQLLQRLDAARKASR

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=188, Percent_Identity=28.1914893617021, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 22082; Mature: 22082

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHPLVLPLSRDKVRALAVGDMVTLDGEITVSIGLQTHQRMVQAVGDGQALPVDLRAGAF
CCCCEEEECCCCCEEEEEECCEEEECCEEEEEECCHHHHHHHHHHCCCCCCEEEECCCCC
FHLSTCVRDTGDGPQPLYTNPSTSTRYNAWMPSLVRGLDLRLTGGKGGLDAASVQALRDT
EEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHC
GCVYLSFLGGGAPLLSRGLRGLVSSHWNEYISQFRLLTLRVAAFGPATVAIDAHGNSLYE
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHH
QLRGQAQARMPQLLQRLDAARKASR
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHPLVLPLSRDKVRALAVGDMVTLDGEITVSIGLQTHQRMVQAVGDGQALPVDLRAGAF
CCCCEEEECCCCCEEEEEECCEEEECCEEEEEECCHHHHHHHHHHCCCCCCEEEECCCCC
FHLSTCVRDTGDGPQPLYTNPSTSTRYNAWMPSLVRGLDLRLTGGKGGLDAASVQALRDT
EEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHC
GCVYLSFLGGGAPLLSRGLRGLVSSHWNEYISQFRLLTLRVAAFGPATVAIDAHGNSLYE
CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCHHHHH
QLRGQAQARMPQLLQRLDAARKASR
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]