| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610000
Identifier: 121610000
GI number: 121610000
Start: 3409799
End: 3410083
Strand: Direct
Name: 121610000
Synonym: Veis_3056
Alternate gene names: NA
Gene position: 3409799-3410083 (Clockwise)
Preceding gene: 121609999
Following gene: 121610001
Centisome position: 61.25
GC content: 67.72
Gene sequence:
>285_bases GTGTCGCGTCACGGATCAGATGTCGTAGGCTGCGCGCAGCCATCGGAGCGTAGCGCAAGGCGCATCGCGCAGCCAATACC GAGCGTATTGGCAAGCGATGCAACGCCGCGATGCGCTTCGATGGCCAGCGCAGACCGACAGATGATCGGTGACGCGACAC TAGGGCCAGGGATGCCCGCCGTGCGGTGGGTGTGGTGCTGCGGTGGCGGACGGATATCGGCGCGCAGTCCGCGCCGGTTC ACCGGCCGCCTGCCCGGTGGGCCGCTGCGACTTTTCTGCTGCTGA
Upstream 100 bases:
>100_bases GAGCCTGTGGCTGGATCTGCAAATCATGCTGTGGAGCCTGCGGCGGTTGGGCGGCAAGGCGGCGAATTAGCCTGGCCACC GGAATTGCCGGGGCCTGCTA
Downstream 100 bases:
>100_bases AAACTGCCAAGAATGGGCTTGAACACTGGCCGGCGACGGCGCATCGTATGGCCATCAAAACAAGCGGACCTGCGCCACCA TGGCCATCGACAGTGCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLGPGMPAVRWVWCCGGGRISARSPRRF TGRLPGGPLRLFCC
Sequences:
>Translated_94_residues MSRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLGPGMPAVRWVWCCGGGRISARSPRRF TGRLPGGPLRLFCC >Mature_93_residues SRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLGPGMPAVRWVWCCGGGRISARSPRRFT GRLPGGPLRLFCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9942; Mature: 9810
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 10.6 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLGPGMPA CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC VRWVWCCGGGRISARSPRRFTGRLPGGPLRLFCC CEEEEECCCCEECCCCCCCEECCCCCCCEEEEEC >Mature Secondary Structure SRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLGPGMPA CCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC VRWVWCCGGGRISARSPRRFTGRLPGGPLRLFCC CEEEEECCCCEECCCCCCCEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA