| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609997
Identifier: 121609997
GI number: 121609997
Start: 3406630
End: 3408204
Strand: Direct
Name: 121609997
Synonym: Veis_3053
Alternate gene names: NA
Gene position: 3406630-3408204 (Clockwise)
Preceding gene: 121609994
Following gene: 121609998
Centisome position: 61.2
GC content: 71.68
Gene sequence:
>1575_bases ATGTTCTTCAAAGCCGGCCTGCTCTCGCTGCTGCTGCTGCTGGCCAGCCGTGCGCTCGGGGTGCTGCGCGAGACGGCCCT TGCCGCTGCCTTCGGCAGTTCCGGCATGGCCGATGTGGTCATCGTGATGCTGACCCTGCCCGATTGGCTGGCTGGCGTCG TGGCCGGCGGCGCATTGGCCTATGTGCTGCTGCCCCATTGGGCGCAAGAGACGCCGGCGCAGCAGCAGGCAACGCAAAAC CGGGTGGCCAGGCGACTGCTGTGGACGGCGGGATGGCTCGCCGCCGGCATCGGCATCGCGCAAGTGCCATTGGGCGCGTT GCTGATGCCCGGTCTGCCGCCTGCGCTACAGGGCGCGGCCCACCAGGCGCTGCTCTGGAGCGCTGTGGCATTGCCGGCGG CGATGCTTGCGGGCCTGTGGGCGGCGCGGCTGCAGCATGAGCGCGATGTCGTCGGCCTGTACAGCGCCAACCTGCTCGTC AACGGCGTGCTGATTGCGGCCCTGCTCCTGCTCGGCGGGACGGGGGCGGGCGTGGCTGACGGGCCCGGGTTGGGCGCCTT TTTGCTGCTCGCCGTGGTCTTGCGGCTGCTGTGGCAGGGATGGCGTTTGCGGCATCGGGGCCAGCGTGCGCAGCCGCCAG CGCCGCCGGCCTCGCTGGCACCTGCCGCGCCTGCGATACCTGCGATGCCTGTGGCGCCTGTGGCGCCGGCCCCGCTGCCG GGCTGGCGTGTCTGGCTCTGGGCGGCTCTGGGCGCGGGCCTGCCGCTGACGCTGCCCTTTGTCGCCCGGACGCTGGCTTC CGGCGCCGGCGAGGGGGCCTTGGCCACGTTCAACTACGCTTGGAAACTGGTCGAATTGCCGCTGGTGCTGGCCATACAGT TGGTGGCCGCGCTGGCCTTTCCGGCGATTGCGCAGGCCCATGCCGATGGCAAAGACGCGCACGCGCTGGCGCGCGCCGTC CGCAGCGCCCTGGTCATGGCCTGGACGCTGGCCTGCGCCAGCGCGGCGGCCTTGCTGGCTGGCGCGCCGGTGATCGCCCG ATTGCTGTTTGGCTGGGGGCGCATGCAGGCGCCGGCGCTCGAGCAGATTGCCGCCTGGGGCAGTGCCGGTGCCTGGGGGC TGCTGCCGCAGGCGCTGCTGGCCGTGGCGTTGACGGTGCTGGCCACCTGGGGGCGCATGCGGTTTGCGGTGCTGGCCTAT GCGCTGGCGCTGGCGCTGCTGCTGCTGGCGGGGGTGCTGGGGCTGACGGCAGGCCAGCAGCTGATGTGGGCCTTGAATGC CGGTTTCATGGTGGCGGCCCTGGTCGCCTGGAGCGCGCTGGGTGCCGTGCGGCACTGGGTGCCGCTGCGCACGCTGCTGG CTCCGTTCGCGGCCTTGCTGGTGGTGGCTTGGCTGGTGCAATGGCTCGGCCCTGCGGATGGCATCGCCCCCATCGTCCCC ATCGGTCATGGACGGTTGCGCGAACTGGTGCCGCAATTGCTGCCGCAACTGCTGCTGTGCGCGCTGGCGGCGCTGGCCGT GATCGCGTCTGGCTGGTTCTCGGGGCCTCATCTGCGCAATGCCCTGCGGTCCTAG
Upstream 100 bases:
>100_bases CTGAGGCGTTCGCAAGCATTCAGGGGAGTTGTTTCGGGGCGCAATCGGCGATTTTAGTTTTTTGCCGCCCCGTTTCGGCT GAGCCTGGATAATTTGCCGC
Downstream 100 bases:
>100_bases TGTCGCGTCACCGATCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACAGCTC GGTATGGGCTGCGCGCAGCC
Product: virulence factor MVIN family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MFFKAGLLSLLLLLASRALGVLRETALAAAFGSSGMADVVIVMLTLPDWLAGVVAGGALAYVLLPHWAQETPAQQQATQN RVARRLLWTAGWLAAGIGIAQVPLGALLMPGLPPALQGAAHQALLWSAVALPAAMLAGLWAARLQHERDVVGLYSANLLV NGVLIAALLLLGGTGAGVADGPGLGAFLLLAVVLRLLWQGWRLRHRGQRAQPPAPPASLAPAAPAIPAMPVAPVAPAPLP GWRVWLWAALGAGLPLTLPFVARTLASGAGEGALATFNYAWKLVELPLVLAIQLVAALAFPAIAQAHADGKDAHALARAV RSALVMAWTLACASAAALLAGAPVIARLLFGWGRMQAPALEQIAAWGSAGAWGLLPQALLAVALTVLATWGRMRFAVLAY ALALALLLLAGVLGLTAGQQLMWALNAGFMVAALVAWSALGAVRHWVPLRTLLAPFAALLVVAWLVQWLGPADGIAPIVP IGHGRLRELVPQLLPQLLLCALAALAVIASGWFSGPHLRNALRS
Sequences:
>Translated_524_residues MFFKAGLLSLLLLLASRALGVLRETALAAAFGSSGMADVVIVMLTLPDWLAGVVAGGALAYVLLPHWAQETPAQQQATQN RVARRLLWTAGWLAAGIGIAQVPLGALLMPGLPPALQGAAHQALLWSAVALPAAMLAGLWAARLQHERDVVGLYSANLLV NGVLIAALLLLGGTGAGVADGPGLGAFLLLAVVLRLLWQGWRLRHRGQRAQPPAPPASLAPAAPAIPAMPVAPVAPAPLP GWRVWLWAALGAGLPLTLPFVARTLASGAGEGALATFNYAWKLVELPLVLAIQLVAALAFPAIAQAHADGKDAHALARAV RSALVMAWTLACASAAALLAGAPVIARLLFGWGRMQAPALEQIAAWGSAGAWGLLPQALLAVALTVLATWGRMRFAVLAY ALALALLLLAGVLGLTAGQQLMWALNAGFMVAALVAWSALGAVRHWVPLRTLLAPFAALLVVAWLVQWLGPADGIAPIVP IGHGRLRELVPQLLPQLLLCALAALAVIASGWFSGPHLRNALRS >Mature_524_residues MFFKAGLLSLLLLLASRALGVLRETALAAAFGSSGMADVVIVMLTLPDWLAGVVAGGALAYVLLPHWAQETPAQQQATQN RVARRLLWTAGWLAAGIGIAQVPLGALLMPGLPPALQGAAHQALLWSAVALPAAMLAGLWAARLQHERDVVGLYSANLLV NGVLIAALLLLGGTGAGVADGPGLGAFLLLAVVLRLLWQGWRLRHRGQRAQPPAPPASLAPAAPAIPAMPVAPVAPAPLP GWRVWLWAALGAGLPLTLPFVARTLASGAGEGALATFNYAWKLVELPLVLAIQLVAALAFPAIAQAHADGKDAHALARAV RSALVMAWTLACASAAALLAGAPVIARLLFGWGRMQAPALEQIAAWGSAGAWGLLPQALLAVALTVLATWGRMRFAVLAY ALALALLLLAGVLGLTAGQQLMWALNAGFMVAALVAWSALGAVRHWVPLRTLLAPFAALLVVAWLVQWLGPADGIAPIVP IGHGRLRELVPQLLPQLLLCALAALAVIASGWFSGPHLRNALRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54179; Mature: 54179
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: PS01078 MOCF_BIOSYNTHESIS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKAGLLSLLLLLASRALGVLRETALAAAFGSSGMADVVIVMLTLPDWLAGVVAGGALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVLLPHWAQETPAQQQATQNRVARRLLWTAGWLAAGIGIAQVPLGALLMPGLPPALQGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH HQALLWSAVALPAAMLAGLWAARLQHERDVVGLYSANLLVNGVLIAALLLLGGTGAGVAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPGLGAFLLLAVVLRLLWQGWRLRHRGQRAQPPAPPASLAPAAPAIPAMPVAPVAPAPLP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWRVWLWAALGAGLPLTLPFVARTLASGAGEGALATFNYAWKLVELPLVLAIQLVAALAF HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH PAIAQAHADGKDAHALARAVRSALVMAWTLACASAAALLAGAPVIARLLFGWGRMQAPAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHH EQIAAWGSAGAWGLLPQALLAVALTVLATWGRMRFAVLAYALALALLLLAGVLGLTAGQQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LMWALNAGFMVAALVAWSALGAVRHWVPLRTLLAPFAALLVVAWLVQWLGPADGIAPIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IGHGRLRELVPQLLPQLLLCALAALAVIASGWFSGPHLRNALRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MFFKAGLLSLLLLLASRALGVLRETALAAAFGSSGMADVVIVMLTLPDWLAGVVAGGALA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YVLLPHWAQETPAQQQATQNRVARRLLWTAGWLAAGIGIAQVPLGALLMPGLPPALQGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH HQALLWSAVALPAAMLAGLWAARLQHERDVVGLYSANLLVNGVLIAALLLLGGTGAGVAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GPGLGAFLLLAVVLRLLWQGWRLRHRGQRAQPPAPPASLAPAAPAIPAMPVAPVAPAPLP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWRVWLWAALGAGLPLTLPFVARTLASGAGEGALATFNYAWKLVELPLVLAIQLVAALAF HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH PAIAQAHADGKDAHALARAVRSALVMAWTLACASAAALLAGAPVIARLLFGWGRMQAPAL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHH EQIAAWGSAGAWGLLPQALLAVALTVLATWGRMRFAVLAYALALALLLLAGVLGLTAGQQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LMWALNAGFMVAALVAWSALGAVRHWVPLRTLLAPFAALLVVAWLVQWLGPADGIAPIVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC IGHGRLRELVPQLLPQLLLCALAALAVIASGWFSGPHLRNALRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA