Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639442
Identifier: 121639442
GI number: 121639442
Start: 3938421
End: 3939605
Strand: Direct
Name: 121639442
Synonym: BCG_3587
Alternate gene names: NA
Gene position: 3938421-3939605 (Clockwise)
Preceding gene: 121639441
Following gene: 121639443
Centisome position: 90.03
GC content: 65.49
Gene sequence:
>1185_bases ATGGCCGGAAAGCTGGCCGCCGTACTCGGCACCGGGCAGACCAAGTATGTCGCCAAGCGCCAAGACGTTTCGATGAACGG TCTGGTGCGGGAGGCCATCGACCGAGCGCTGGCGGATTCCGGTTCCACCTTCGACGACATCGACGCCGTCGTGGTCGGCA AGGCGCCCGACTTCTTCGAAGGGGTGATGATGCCGGAGCTATTCATGGCCGACGCCATGGGCGCGACCGGCAAGCCGCTG ATCCGGGTACACACCGCCGGTTCGGTTGGCGGATCCACCGGGGTAGTGGCTGCCAGCCTGGTGCAATCCGGCAAATACCG CCGGGTCCTGGCATTAGCCTGGGAAAAGCAGTCGGAATCCAATGCCATGTGGGCGTTGTCGATTCCTGTGCCGTTCACCA AACCGGTCGGTGCCGGTGCGGGGGGATACTTCGCCCCGCATGTCCGGGCCTATATCCGCCGCTCGGGCGCACCGGCACAC ATCGGTGCTATGGTTGCGGTCAAGGACCGGCTCAACGGCAGCCGCAACCCGTTGGCACATCTGCAGCAGCCCGACATCAC CCTGGAGAAGGTGATGGCATCTCAGATGCTCTGGGATCCAATACGTTTCGATGAGACGTGCCCGTCGTCAGACGGTGCGT GCGCGGTTGTCGTCGGCGACGAGGAGATCGCCGACGCGCGACTGGCGCAAGGGCATCCGGTGGCCTGGATTCATGGCACC GCATTACGCACCGAGCCGCTGGCTTTCGCCGGGCGCGACCAGGTCAACCCGCAGGCCGGCCGCGACGCGGCGGCGGCGCT GTGGAAGGCCGCGGGCATCACCAGCCCCATCGACGAAATCGACGCCGCCGAAATTTACGTCCCGTTCTCCTGGTTCGAGC CGATGTGGTTGGAGAATCTGGGATTTGCCCGCGAGGGCGAGGGCTGGAAGCTCACCGAGGCCGGCGAGACTGCGATCGGC GGTCGACTACCGGTGAACCCTTCCGGCGGCGTGCTGTCCGCCAATCCGATCGGCGCATCGGGCCTGATCCGCTTCGCCGA GGCCGCGATCCAAGTCATGGGCAAGGCGGAGGCGCGTCAAGTTCCGGGTGCGCGAAAGGCCTTGGGGCACGCTTACGGTG GCGGCTCGCAGTACTTCTCTATGTGGGTGGTCGGCTGCGAGAAACCCAAACAGGCAGCCGCATAA
Upstream 100 bases:
>100_bases TCGGCGCGGCGCGTGCTGGCGCACGCCACCAGCGGACCGGCGCTGCAGCAAAACCTGGTCGCGGTCATGGAAGGACGGGG ATAGTGGAGGGGCAGCGCTG
Downstream 100 bases:
>100_bases TCGCCCGGCGCGATCCGGGCGACGCCGCAGACCATCCGAGCATGGTGAAGTTCACACCCGATAGCCAGACGTCAGTTCTG CGCGCGGGCAAGTGCTCAGG
Product: acetyl-CoA acetyltransferase
Products: CoA; 3-oxoacyl-CoA
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MAGKLAAVLGTGQTKYVAKRQDVSMNGLVREAIDRALADSGSTFDDIDAVVVGKAPDFFEGVMMPELFMADAMGATGKPL IRVHTAGSVGGSTGVVAASLVQSGKYRRVLALAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPAH IGAMVAVKDRLNGSRNPLAHLQQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVVGDEEIADARLAQGHPVAWIHGT ALRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITSPIDEIDAAEIYVPFSWFEPMWLENLGFAREGEGWKLTEAGETAIG GRLPVNPSGGVLSANPIGASGLIRFAEAAIQVMGKAEARQVPGARKALGHAYGGGSQYFSMWVVGCEKPKQAAA
Sequences:
>Translated_394_residues MAGKLAAVLGTGQTKYVAKRQDVSMNGLVREAIDRALADSGSTFDDIDAVVVGKAPDFFEGVMMPELFMADAMGATGKPL IRVHTAGSVGGSTGVVAASLVQSGKYRRVLALAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPAH IGAMVAVKDRLNGSRNPLAHLQQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVVGDEEIADARLAQGHPVAWIHGT ALRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITSPIDEIDAAEIYVPFSWFEPMWLENLGFAREGEGWKLTEAGETAIG GRLPVNPSGGVLSANPIGASGLIRFAEAAIQVMGKAEARQVPGARKALGHAYGGGSQYFSMWVVGCEKPKQAAA >Mature_393_residues AGKLAAVLGTGQTKYVAKRQDVSMNGLVREAIDRALADSGSTFDDIDAVVVGKAPDFFEGVMMPELFMADAMGATGKPLI RVHTAGSVGGSTGVVAASLVQSGKYRRVLALAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPAHI GAMVAVKDRLNGSRNPLAHLQQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVVGDEEIADARLAQGHPVAWIHGTA LRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITSPIDEIDAAEIYVPFSWFEPMWLENLGFAREGEGWKLTEAGETAIGG RLPVNPSGGVLSANPIGASGLIRFAEAAIQVMGKAEARQVPGARKALGHAYGGGSQYFSMWVVGCEKPKQAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=397, Percent_Identity=29.7229219143577, Blast_Score=140, Evalue=1e-33, Organism=Homo sapiens, GI302344760, Length=331, Percent_Identity=30.2114803625378, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI302344767, Length=327, Percent_Identity=30.2752293577982, Blast_Score=126, Evalue=3e-29, Organism=Homo sapiens, GI302344762, Length=294, Percent_Identity=30.2721088435374, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI55956775, Length=249, Percent_Identity=28.1124497991968, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17537653, Length=388, Percent_Identity=25.5154639175258, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI19921506, Length=400, Percent_Identity=29.5, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI24585051, Length=407, Percent_Identity=29.2383292383292, Blast_Score=133, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: 2.3.1.16
Molecular weight: Translated: 41422; Mature: 41290
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKLAAVLGTGQTKYVAKRQDVSMNGLVREAIDRALADSGSTFDDIDAVVVGKAPDFFE CCCCEEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH GVMMPELFMADAMGATGKPLIRVHTAGSVGGSTGVVAASLVQSGKYRRVLALAWEKQSES HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC NAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPAHIGAMVAVKDRLNGSRNPLAH CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEEEHHHCCCCCCCHHH LQQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVVGDEEIADARLAQGHPVAWIHGT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECC ALRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITSPIDEIDAAEIYVPFSWFEPMWLENL EECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCEEEEEEHHHCCCHHHHHC GFAREGEGWKLTEAGETAIGGRLPVNPSGGVLSANPIGASGLIRFAEAAIQVMGKAEARQ CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHH VPGARKALGHAYGGGSQYFSMWVVGCEKPKQAAA CCCHHHHHHHCCCCCCCEEEEEEEECCCCHHCCC >Mature Secondary Structure AGKLAAVLGTGQTKYVAKRQDVSMNGLVREAIDRALADSGSTFDDIDAVVVGKAPDFFE CCCEEEEEECCCCCEEHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHH GVMMPELFMADAMGATGKPLIRVHTAGSVGGSTGVVAASLVQSGKYRRVLALAWEKQSES HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCC NAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPAHIGAMVAVKDRLNGSRNPLAH CCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHEEEEEEHHHCCCCCCCHHH LQQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVVGDEEIADARLAQGHPVAWIHGT CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECC ALRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITSPIDEIDAAEIYVPFSWFEPMWLENL EECCCCCEECCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCEEEEEEHHHCCCHHHHHC GFAREGEGWKLTEAGETAIGGRLPVNPSGGVLSANPIGASGLIRFAEAAIQVMGKAEARQ CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHH VPGARKALGHAYGGGSQYFSMWVVGCEKPKQAAA CCCHHHHHHHCCCCCCCEEEEEEEECCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA; acetyl-CoA
Specific reaction: acyl-CoA + acetyl-CoA = CoA + 3-oxoacyl-CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]