Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639441
Identifier: 121639441
GI number: 121639441
Start: 3937340
End: 3938404
Strand: Direct
Name: 121639441
Synonym: BCG_3586
Alternate gene names: NA
Gene position: 3937340-3938404 (Clockwise)
Preceding gene: 121639440
Following gene: 121639442
Centisome position: 90.01
GC content: 65.63
Gene sequence:
>1065_bases ATGAGCGTTCGCGATATTGCCGTTGTCGGCTTCGCCCACGCCCCGCACGTGCGCCGCACCGACGGCACTACCAACGGCGT CGAGATGCTGATGCCGTGCTTCGCCCAGCTATACGACGAGCTGGGCATCACCAAGGCCGACATCGGATTCTGGTGTTCGG GTTCGTCGGATTACCTGGCTGGACGAGCATTTTCGTTCATCTCCGCGATCGACTCCATCGGAGCCGTACCGCCGATCAAC GAATCGCACGTCGAGATGGACGCCGCCTGGGCACTGTATGAGGCCTACATCAAACTGCTGACCGGCGAGGTCGACACCGC GCTGGTGTACGGCTTCGGGAAGTCCTCGGCCGGAACGCTGCGCCGTGTGCTGTCCCGCCAGACCGACCCGTACACCGTCG CGCCGCTGTGGCCGGATTCGGTATCGATGGCGGGACTGCAGGCGCGGTTGGGGCTGGACTCCGGCAAGTGGACCCACGAG CAGATGGCGCGAGTGGCGTTCGATTCCTTCACCAACGCTCGCCGGGTGGATTCCGTGGAGCCGCCGATCACCGTCGGGGA ACTGCTGGCACGGCCGTTTTTTGCCGATCCGCTGCGGCGCCACGACATTGCGCCGATTACCGACGGTGCCGCCGCGGTCG TGCTCGCGGCCGACAACCGCGCCCGAGAACTGCGCGAAAATCCGGCGTGGATCACCGGAATCGAACATCGCATCGAGTCT CCGGCGCTGGGGGCGCGCGACATCACCGAGTCTCCGTCGACCAAACTGGCGGCCAAGATAGCCACCGGCGGACACACCGG CGACATCGACGTGGCGGAGATCCATGGGCCCTTTACCCACCAGCACCTGATCGTCGCGGAGGCCATCAGGATTCCGGGTA AGACGAAAGTGAATCCGTCCGGCGGCCCGTTGGCCGCCAACCCCATGTTCGCCGCCGGCCTTGAGCGTATCGGCTTTGCC GCACAACATATCTGGGACGGATCGGCGCGGCGCGTGCTGGCGCACGCCACCAGCGGACCGGCGCTGCAGCAAAACCTGGT CGCGGTCATGGAAGGACGGGGATAG
Upstream 100 bases:
>100_bases GGGACTGGGCATCGACAACATCGAGTACTTCCGCCCCACCGGCGAACCGGATGCCGACTACGACACCTACAAGCACCACC TGTAAAGGGCCCACCAACCA
Downstream 100 bases:
>100_bases TGGAGGGGCAGCGCTGATGGCCGGAAAGCTGGCCGCCGTACTCGGCACCGGGCAGACCAAGTATGTCGCCAAGCGCCAAG ACGTTTCGATGAACGGTCTG
Product: lipid-transfer protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MSVRDIAVVGFAHAPHVRRTDGTTNGVEMLMPCFAQLYDELGITKADIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPIN ESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGKSSAGTLRRVLSRQTDPYTVAPLWPDSVSMAGLQARLGLDSGKWTHE QMARVAFDSFTNARRVDSVEPPITVGELLARPFFADPLRRHDIAPITDGAAAVVLAADNRARELRENPAWITGIEHRIES PALGARDITESPSTKLAAKIATGGHTGDIDVAEIHGPFTHQHLIVAEAIRIPGKTKVNPSGGPLAANPMFAAGLERIGFA AQHIWDGSARRVLAHATSGPALQQNLVAVMEGRG
Sequences:
>Translated_354_residues MSVRDIAVVGFAHAPHVRRTDGTTNGVEMLMPCFAQLYDELGITKADIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPIN ESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGKSSAGTLRRVLSRQTDPYTVAPLWPDSVSMAGLQARLGLDSGKWTHE QMARVAFDSFTNARRVDSVEPPITVGELLARPFFADPLRRHDIAPITDGAAAVVLAADNRARELRENPAWITGIEHRIES PALGARDITESPSTKLAAKIATGGHTGDIDVAEIHGPFTHQHLIVAEAIRIPGKTKVNPSGGPLAANPMFAAGLERIGFA AQHIWDGSARRVLAHATSGPALQQNLVAVMEGRG >Mature_353_residues SVRDIAVVGFAHAPHVRRTDGTTNGVEMLMPCFAQLYDELGITKADIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINE SHVEMDAAWALYEAYIKLLTGEVDTALVYGFGKSSAGTLRRVLSRQTDPYTVAPLWPDSVSMAGLQARLGLDSGKWTHEQ MARVAFDSFTNARRVDSVEPPITVGELLARPFFADPLRRHDIAPITDGAAAVVLAADNRARELRENPAWITGIEHRIESP ALGARDITESPSTKLAAKIATGGHTGDIDVAEIHGPFTHQHLIVAEAIRIPGKTKVNPSGGPLAANPMFAAGLERIGFAA QHIWDGSARRVLAHATSGPALQQNLVAVMEGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 37877; Mature: 37746
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRDIAVVGFAHAPHVRRTDGTTNGVEMLMPCFAQLYDELGITKADIGFWCSGSSDYLA CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCHH GRAFSFISAIDSIGAVPPINESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGKSSAGTL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH RRVLSRQTDPYTVAPLWPDSVSMAGLQARLGLDSGKWTHEQMARVAFDSFTNARRVDSVE HHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PPITVGELLARPFFADPLRRHDIAPITDGAAAVVLAADNRARELRENPAWITGIEHRIES CCCCHHHHHHCCHHCCCHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEHHHHHCCC PALGARDITESPSTKLAAKIATGGHTGDIDVAEIHGPFTHQHLIVAEAIRIPGKTKVNPS CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEECCC GGPLAANPMFAAGLERIGFAAQHIWDGSARRVLAHATSGPALQQNLVAVMEGRG CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SVRDIAVVGFAHAPHVRRTDGTTNGVEMLMPCFAQLYDELGITKADIGFWCSGSSDYLA CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCEEECCCCCCHH GRAFSFISAIDSIGAVPPINESHVEMDAAWALYEAYIKLLTGEVDTALVYGFGKSSAGTL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH RRVLSRQTDPYTVAPLWPDSVSMAGLQARLGLDSGKWTHEQMARVAFDSFTNARRVDSVE HHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC PPITVGELLARPFFADPLRRHDIAPITDGAAAVVLAADNRARELRENPAWITGIEHRIES CCCCHHHHHHCCHHCCCHHHCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEHHHHHCCC PALGARDITESPSTKLAAKIATGGHTGDIDVAEIHGPFTHQHLIVAEAIRIPGKTKVNPS CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEECCC GGPLAANPMFAAGLERIGFAAQHIWDGSARRVLAHATSGPALQQNLVAVMEGRG CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]