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The map label for this gene is pknD [H]

Identifier: 121639443

GI number: 121639443

Start: 3939647

End: 3940678

Strand: Direct

Name: pknD [H]

Synonym: BCG_3588

Alternate gene names: 121639443

Gene position: 3939647-3940678 (Clockwise)

Preceding gene: 121639442

Following gene: 121639445

Centisome position: 90.06

GC content: 62.02

Gene sequence:

>1032_bases
ATGGTGAAGTTCACACCCGATAGCCAGACGTCAGTTCTGCGCGCGGGCAAGTGCTCAGGTACTCTTTCTCCGTCGCGGTC
GCGATTGCAAAGGGGGAGCTGGCCGGTGGATTCCGAACGCCGACGCTACGGGTGGCCGCGGAATCGACGCACCTTAGCCA
TTACTGGAGCTGCAGTCGTTGTCGTGGTGACCCTCGCAGCCATTGGTTACCTGATCTTTGAGCCAAAAATTTCTGGGTCG
TCCACGTCCAGGCAGGCCGCATCGCCAACCACTCCTTCCCCGCCCAGCCAGGTCGTGGTGCCGATCGACCTTTGGAATCC
CGACGGGGTGACGGTGGACCTGGCGGACGCCGTTTACGTGGCCGACTCCGGTCACAAGCGACTGCTGAAACTGCCGGCCG
GCTCCAACACCCCGACCACGTTGCCATTCACCGACACCATCGGTCCAGGCGGCGTGGCGGTAAACAGCAACCGCGACGTC
TATGTCATCGATGAAGACAGCCACCATGTGTTGAAACTCGCGGCCGGCATCGAACCCCCGGTCGAGCTCCCGTTCGGCAG
CCTTGGCGATGCGCATGGTTTGGCAGTGGACCGCAGCGACAGCGTCTATGTCGTCGACTATGACAATGCCAAAGTGTTGA
AACTGCCCCCAGGCGCAGATACCCCTACCGAACTGCCGTTCGTCGGGCTCGACCACCCCTATGATGTGGCGGTGGACGGT
GCTGGCACCGTCTACGTGACCGACAGCGGCCACAATCGCGTGGTGGCGTTGACCGCGGGGTCGGCCACGCCGGTGCACCT
CCCATTCGCCGATCTCAGCTTTCCCGCCGGTGTGACGGTGGACCGCGACGATAGCGTCTATGTGGCCGATCTGAACAACA
ATCGGGTGCTGAAGCTGGCGGCCGGCTCGAATGCGCAGTCGCAGCTGCCGTTCACCGGACTCTTCTCCCCAACTGATGTG
GCGGTGGACAACGACGGCGCCGTCTACGTGATCGACTTTTACAACCGGATGTTAAAACTGCCGACGGCTTAA

Upstream 100 bases:

>100_bases
CGCAGTACTTCTCTATGTGGGTGGTCGGCTGCGAGAAACCCAAACAGGCAGCCGCATAATCGCCCGGCGCGATCCGGGCG
ACGCCGCAGACCATCCGAGC

Downstream 100 bases:

>100_bases
CCCGCAGCGACGCCTACATGGGTTCCAGTCCGGCCAGATGCCGTGCAGCCAGGTCACGATAGGCCTGCGGATTGACGTTA
ACCCACATTTCCGCGCCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVKFTPDSQTSVLRAGKCSGTLSPSRSRLQRGSWPVDSERRRYGWPRNRRTLAITGAAVVVVVTLAAIGYLIFEPKISGS
STSRQAASPTTPSPPSQVVVPIDLWNPDGVTVDLADAVYVADSGHKRLLKLPAGSNTPTTLPFTDTIGPGGVAVNSNRDV
YVIDEDSHHVLKLAAGIEPPVELPFGSLGDAHGLAVDRSDSVYVVDYDNAKVLKLPPGADTPTELPFVGLDHPYDVAVDG
AGTVYVTDSGHNRVVALTAGSATPVHLPFADLSFPAGVTVDRDDSVYVADLNNNRVLKLAAGSNAQSQLPFTGLFSPTDV
AVDNDGAVYVIDFYNRMLKLPTA

Sequences:

>Translated_343_residues
MVKFTPDSQTSVLRAGKCSGTLSPSRSRLQRGSWPVDSERRRYGWPRNRRTLAITGAAVVVVVTLAAIGYLIFEPKISGS
STSRQAASPTTPSPPSQVVVPIDLWNPDGVTVDLADAVYVADSGHKRLLKLPAGSNTPTTLPFTDTIGPGGVAVNSNRDV
YVIDEDSHHVLKLAAGIEPPVELPFGSLGDAHGLAVDRSDSVYVVDYDNAKVLKLPPGADTPTELPFVGLDHPYDVAVDG
AGTVYVTDSGHNRVVALTAGSATPVHLPFADLSFPAGVTVDRDDSVYVADLNNNRVLKLAAGSNAQSQLPFTGLFSPTDV
AVDNDGAVYVIDFYNRMLKLPTA
>Mature_343_residues
MVKFTPDSQTSVLRAGKCSGTLSPSRSRLQRGSWPVDSERRRYGWPRNRRTLAITGAAVVVVVTLAAIGYLIFEPKISGS
STSRQAASPTTPSPPSQVVVPIDLWNPDGVTVDLADAVYVADSGHKRLLKLPAGSNTPTTLPFTDTIGPGGVAVNSNRDV
YVIDEDSHHVLKLAAGIEPPVELPFGSLGDAHGLAVDRSDSVYVVDYDNAKVLKLPPGADTPTELPFVGLDHPYDVAVDG
AGTVYVTDSGHNRVVALTAGSATPVHLPFADLSFPAGVTVDRDDSVYVADLNNNRVLKLAAGSNAQSQLPFTGLFSPTDV
AVDNDGAVYVIDFYNRMLKLPTA

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 protein kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011009
- InterPro:   IPR001258
- InterPro:   IPR013017
- InterPro:   IPR000719
- InterPro:   IPR017441
- InterPro:   IPR017442
- InterPro:   IPR008271 [H]

Pfam domain/function: PF01436 NHL; PF00069 Pkinase [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 36286; Mature: 36286

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS51125 NHL L=RR ; PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKFTPDSQTSVLRAGKCSGTLSPSRSRLQRGSWPVDSERRRYGWPRNRRTLAITGAAVV
CEEECCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHH
VVVTLAAIGYLIFEPKISGSSTSRQAASPTTPSPPSQVVVPIDLWNPDGVTVDLADAVYV
HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCEEEE
ADSGHKRLLKLPAGSNTPTTLPFTDTIGPGGVAVNSNRDVYVIDEDSHHVLKLAAGIEPP
ECCCCEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCC
VELPFGSLGDAHGLAVDRSDSVYVVDYDNAKVLKLPPGADTPTELPFVGLDHPYDVAVDG
CCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCEEECCCCCEEEECC
AGTVYVTDSGHNRVVALTAGSATPVHLPFADLSFPAGVTVDRDDSVYVADLNNNRVLKLA
CCEEEEEECCCCEEEEEECCCCCEEEEEHHCCCCCCCEEECCCCCEEEEECCCCEEEEEE
AGSNAQSQLPFTGLFSPTDVAVDNDGAVYVIDFYNRMLKLPTA
ECCCCCCCCCEEECCCCCCEEECCCCCEEEEEECHHEEECCCC
>Mature Secondary Structure
MVKFTPDSQTSVLRAGKCSGTLSPSRSRLQRGSWPVDSERRRYGWPRNRRTLAITGAAVV
CEEECCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHCCCCCCCEEEEEECHHHH
VVVTLAAIGYLIFEPKISGSSTSRQAASPTTPSPPSQVVVPIDLWNPDGVTVDLADAVYV
HHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCEEEE
ADSGHKRLLKLPAGSNTPTTLPFTDTIGPGGVAVNSNRDVYVIDEDSHHVLKLAAGIEPP
ECCCCEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCEEEEECCCCEEEEEECCCCCC
VELPFGSLGDAHGLAVDRSDSVYVVDYDNAKVLKLPPGADTPTELPFVGLDHPYDVAVDG
CCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCEEECCCCCEEEECC
AGTVYVTDSGHNRVVALTAGSATPVHLPFADLSFPAGVTVDRDDSVYVADLNNNRVLKLA
CCEEEEEECCCCEEEEEECCCCCEEEEEHHCCCCCCCEEECCCCCEEEEECCCCEEEEEE
AGSNAQSQLPFTGLFSPTDVAVDNDGAVYVIDFYNRMLKLPTA
ECCCCCCCCCEEECCCCCCEEECCCCCEEEEEECHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9119030; 9634230; 12218036 [H]