Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639311
Identifier: 121639311
GI number: 121639311
Start: 3786993
End: 3787670
Strand: Direct
Name: 121639311
Synonym: BCG_3456
Alternate gene names: NA
Gene position: 3786993-3787670 (Clockwise)
Preceding gene: 121639310
Following gene: 121639312
Centisome position: 86.57
GC content: 66.22
Gene sequence:
>678_bases GTGGTACGTAACGCCCAACGTGCGGTGCGCCGCGCCAGTGGGCGGCGCAAAGCCTGGCTACGCCAGGCCATCAACCATCT CGAGAAGCTGATCGGACGCACCGAGCGGGTGGTGGACCAGGCCCGTAGCCGGCTGGCCGGGGTAATGCCCGACTCAAGCA GCCGCCTGGTCAGTCTCCACGATGCCGACGCTCGCCCGATCCGCAAGGGACGATTGGGCAAGCCGGTCGAGTTCGGCTAC AAGGCCCAGGTCGTCGACAACGCCGACGGTGTCATCCTGGACCACAGCGTCGAGCTCGGAAACCCCGCAGATGCACCGCA ATTGGCACCCGCCATCGAACGGATCAGCCGCCGCACCGGACGCCCACCACGGGCAGTGACCGCTGATCGGGGCTGCGGAG ACGCATCGGTCGAAGATGATCTCCACCAGCTCGGGGTGCGCAACGTGGCCATCCCACGCAAGAGCAAACCCAGCGCCACC CGCCGCGCATTCGAACACCGACGGGCATTCCGCGACAAGATCAAATGGCGAACCGGATCCGAAGGACGCATCAACCACCT CAAGCGCAGCTACGGCTGGAACCGCACCGAACTCACCGGCATCACCGGCGCCCGAACCTGGTGCGGACACGGCGTCTTCG CCCACAACCTCGTCAAGATCAGCACCCTGGCAGCGTGA
Upstream 100 bases:
>100_bases ACGCGGCGCGCAGCAACGCGATCAGGCGCAGGCCTTCGTGCGCCGGATCACCGGGGAGCTAGCCGGGATCGCCGAGCAGG CGCTGACCGAGGCTGCCGCG
Downstream 100 bases:
>100_bases CAGACACCCGCGCCCACCCCGACCACGCCACGCAGGTCGCCCAGCCCGCCGCCGTCAATGCAACCGCGACTTTTTCAGGT CTTAGTAATTAGTGGCCGCC
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivatives; Methyl-Accepting Chemotaxis Sensory Transducer
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA
Sequences:
>Translated_225_residues MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA >Mature_225_residues MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25022; Mature: 25022
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLH CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE DADARPIRKGRLGKPVEFGYKAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTG CCCCCCHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC RPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGS CCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC EGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA CCHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLH CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE DADARPIRKGRLGKPVEFGYKAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTG CCCCCCHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC RPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGS CCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC EGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA CCHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA