Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is PE_PGRS52 [H]
Identifier: 121639312
GI number: 121639312
Start: 3787860
End: 3790112
Strand: Direct
Name: PE_PGRS52 [H]
Synonym: BCG_3457
Alternate gene names: 121639312
Gene position: 3787860-3790112 (Clockwise)
Preceding gene: 121639311
Following gene: 121639314
Centisome position: 86.59
GC content: 78.74
Gene sequence:
>2253_bases ATGTCGTTTGTGATCGCGAACCCCGAGATGCTGGCAGCGGCGGCGACCGATTTGGCCGGCATCCGGTCGGCGATCAGCGC CGCGACCGCGGCGGCCGCGGCCCCGACGATCCAGGTTGCCGCGGCCGGCGCCGACGAGGTGTCGCTGGCCATCTCGGCGC TGTTTGGCCAGCACGCCCAGGCCTATCAGGCGCTCAGCGCCCAGGCGACGATCTTTCACGACCAGTTCGTGCAGGCCCTG ACCTCCGGCGGCAACCTGTATGCGGCCGCCGAGAGCCACACCGTCGAGCAGATGGTGCTCAACGCGATCAACGCGCCCAC CCAGACACTGTTCGGCCGCCCGCTGATCGGCGACGGCGCCAACGGGACCGCGGAGAACCCGGACGGCCAAAACGGCGGCC TGCTGTTCGGCAACGGCGGCAACGGCTTTACCCAGACGACCGCCGGGGTGGCCGGCGGCAACGGCGGCAGCGCGGGGTTG ATCGGCAACGGCGGGGCCGGCGGCATCGGGGGCGCGGGCACCGGAACCGGTGGTCACGGCGGGGCCGGCGGGGCCGGCGG CCGGGCCTGGCTGTGGGGCACCGGCGGGGCCGGCGGAGCCGGCGCCGCCGCCGCCATCGGCAACGCCGTCACCCCCGGCG GGGCCGGCGGCGCCGGCGGAGCCGGCGGTGACGGCGGCTGGTTGTTCGGCGACGGCGGGGCCGGCGGCACCGGCGGCAAC GGCGGCAGCGGCTTTAACAGCTTGACCTCTTCGGTCGGCGGCGCCGGCGGGGCCGGTGGGCACGCCGGGCTGTTCGGCGC CGGCGGGACCGGCGGGACCGGCGGCATCGGCGGGCAAAACACCGAGACCGGCCCGGCCGCCAGCAACGGCGGCGCGGGCG GCGCCGGTGGCGGCGGCGGGTACCTGGTCGGCGATGGCGGCGCCGGCGGGACCGGCGGGGCCGGCGGGAAGAATTCCAGC GGTGGCGCCACCCTCACCGGGGGCACCGGAGGGACCGGCGGGGCCGGCGGGGCGGCCGGGTGGCTCTACGGCAGCGGCGG TGCCGGCGGCGCCGGCGGGCTCAACAACGCCGGTGGTGCCACCGGCGGCACCGGCGGTACCGGCGGAGCCGGCGGCTCTG GAGCGTGGCTGTACGGCAACGGCGGGGCCGCCGGGGCCGGCGGCAACGGCGGCAACAATACCAGCGCCGGCACCGGTGGT GTCGGGGCTAGCGGCGGGACCGGCGGAAACGCCGGGCTGATCGGCGCCGGCGGCCACGGCGGGGCCGGCGGCGCCGGCGG AAACCAAACCGGTGGCGTGGGCAACGGCGGGGCCGGCGGGAACGGCGGCGCCGGCGGGGCCGGTGGTCAGCTGTACGGCA ACGGCGGGGACGGCGGCAACGGCGGGGCCGGCGGGGCCAACATCGCCGGCGGCAATGGCAGCGACGGCGGCGCCGCCGGC CACGGCGGGGCCGGCGGGAGCGCCCGGCTGATCGGAGCCGGCGGCCACGGCGGGGACGGCGGCGCCGGCGGGAACACCGC CGGCAGAAGGGCCGACGCGATCGCCGGCACCGGCGGGGACGGCGGCAACGGCGGGAATGGCGGCTTGCTAAGCGGCAACG CCGGGGCCGGCGGCCACGGCGGGGCGGGCGGGAGCAGCACCGCGACCACCACCACCGGAACACCCCCAACGGGTGCAACG GGCGGCAATGGCGGCAACGGCGGGGCCGGCGGCACGGCCGGGTTTACCGGCAGCGGCGGCATCGGCGGCAACGGCGGGGC CGGCGGCACCGGCGGTAACGCCGGTGTCGCCTTGTCGGTTGGCAGCACGGGCGGACTGGGCGGTAACGGCGGCAGCGGGG GCCTCGGCGGCGGCGGCGGGTCGCTCTTCGGCAATGGCGGGGCCGGCGGTGTCGGCGCAACCGGCGGAAACGCCGGAAGC GGTATCGGGCCCGCCAGCGTGGGTGGCAACGGCGGCAAGGGCGGCGTTGGTGCGGCCGGCGGGCTTGCCGGGCAGATCGG CAACGGCGGTAGTGGTGGGTCCGGCGGTGCCGGGGGCAACGGCGGGACCGGCGATACCGCCGGCAACGGTGGCAATGGTG GTGCCGGCGCGGTCGGCGGCAACGCCCAGCTCATCGGCAACGGCGGCAACGGCGGTGGCGGCGGGAACGGCGGAACCGGC GCCACCCCCGGCACCGGCGGCGCCGGCGCCGCCGGCGGCACCGGCGGCACGCTGTTCGGCGCCCCCGGAACCACCGGCGC CGACGGCACCTAA
Upstream 100 bases:
>100_bases TAGTGGCCGCCGCTTTGGGTCCACCGGGGCCCTGCGGCGAAACACCAGACGTGATGCCGTGATCGGCGATACCCTTCGAC CCATTGAAGGGAGAACAGCC
Downstream 100 bases:
>100_bases GGCCCGCGAGCAGACGCAAAATCGCCCAATTTCGTGCCGAATTGGGCGATTTTGCGTCTGCTCGGCGCAGCTAACCCGCC ACGTACTCCACCGCGCCGTC
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 750; Mature: 749
Protein sequence:
>750_residues MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQAYQALSAQATIFHDQFVQAL TSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGL IGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGAGGAGGAGGDGGWLFGDGGAGGTGGN GGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSS GGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGG VGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNGSDGGAAG HGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGNAGAGGHGGAGGSSTATTTTGTPPTGAT GGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGNAGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNAGS GIGPASVGGNGGKGGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGGGGNGGTG ATPGTGGAGAAGGTGGTLFGAPGTTGADGT
Sequences:
>Translated_750_residues MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQAYQALSAQATIFHDQFVQAL TSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGL IGNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGAGGAGGAGGDGGWLFGDGGAGGTGGN GGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSS GGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGG VGASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNGSDGGAAG HGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGNAGAGGHGGAGGSSTATTTTGTPPTGAT GGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGNAGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNAGS GIGPASVGGNGGKGGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGGGGNGGTG ATPGTGGAGAAGGTGGTLFGAPGTTGADGT >Mature_749_residues SFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQAYQALSAQATIFHDQFVQALT SGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGANGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLI GNGGAGGIGGAGTGTGGHGGAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGAGGAGGAGGDGGWLFGDGGAGGTGGNG GSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAGGGGGYLVGDGGAGGTGGAGGKNSSG GATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGLNNAGGATGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGV GASGGTGGNAGLIGAGGHGGAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNGSDGGAAGH GGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGNAGAGGHGGAGGSSTATTTTGTPPTGATG GNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGNAGVALSVGSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNAGSG IGPASVGGNGGKGGVGAAGGLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGGGGNGGTGA TPGTGGAGAAGGTGGTLFGAPGTTGADGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 61934; Mature: 61802
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA HHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTGGHG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC GAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGAGGAGGAGGDGGWLFGDGGAGGTGGN CCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC GGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAGGGGG CCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGLNNAGGA EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC TGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGLIGAGGHG CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC GAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNGSDGGAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC HGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGNAGAGGHG CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCC GAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGNAGVALSV CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNAGSGIGPASVGGNGGKGGVGAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGGGGNGGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC ATPGTGGAGAAGGTGGTLFGAPGTTGADGT CCCCCCCCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure SFVIANPEMLAAAATDLAGIRSAISAATAAAAAPTIQVAAAGADEVSLAISALFGQHAQ EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH AYQALSAQATIFHDQFVQALTSGGNLYAAAESHTVEQMVLNAINAPTQTLFGRPLIGDGA HHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHCCCCCCCCCC NGTAENPDGQNGGLLFGNGGNGFTQTTAGVAGGNGGSAGLIGNGGAGGIGGAGTGTGGHG CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC GAGGAGGRAWLWGTGGAGGAGAAAAIGNAVTPGGAGGAGGAGGDGGWLFGDGGAGGTGGN CCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC GGSGFNSLTSSVGGAGGAGGHAGLFGAGGTGGTGGIGGQNTETGPAASNGGAGGAGGGGG CCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YLVGDGGAGGTGGAGGKNSSGGATLTGGTGGTGGAGGAAGWLYGSGGAGGAGGLNNAGGA EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC TGGTGGTGGAGGSGAWLYGNGGAAGAGGNGGNNTSAGTGGVGASGGTGGNAGLIGAGGHG CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC GAGGAGGNQTGGVGNGGAGGNGGAGGAGGQLYGNGGDGGNGGAGGANIAGGNGSDGGAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC HGGAGGSARLIGAGGHGGDGGAGGNTAGRRADAIAGTGGDGGNGGNGGLLSGNAGAGGHG CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCCCC GAGGSSTATTTTGTPPTGATGGNGGNGGAGGTAGFTGSGGIGGNGGAGGTGGNAGVALSV CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GSTGGLGGNGGSGGLGGGGGSLFGNGGAGGVGATGGNAGSGIGPASVGGNGGKGGVGAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GLAGQIGNGGSGGSGGAGGNGGTGDTAGNGGNGGAGAVGGNAQLIGNGGNGGGGGNGGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC ATPGTGGAGAAGGTGGTLFGAPGTTGADGT CCCCCCCCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]