Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639310
Identifier: 121639310
GI number: 121639310
Start: 3786299
End: 3787003
Strand: Direct
Name: 121639310
Synonym: BCG_3455
Alternate gene names: NA
Gene position: 3786299-3787003 (Clockwise)
Preceding gene: 121639302
Following gene: 121639311
Centisome position: 86.55
GC content: 65.96
Gene sequence:
>705_bases GTGTTTCGTACTGTAGGCGATCAGGCATCGTTGTGGGAATCCGTGCTGCCCGAGGAGTTGCGGCGGCTGCCCGAAGAGCT GGCCCGGGTGGATGCGCTGCTCGATGATTCGGCGTTCTTCTGCCCGTTTGTGCCGTTCTTCGACCCGCGGATGGGTCGGC CGTCCATACCGATGGAGACCTATTTGCGGTTGATGTTCTTGAAGTTCCGTTACCGGTTGGGCTATGAGTCGCTGTGTCGG GAGGTCACCGATTCGATCACCTGGCGGCGGTTCTGCCGTATTCCGTTGGAGGGATCGGTGCCGCACCCAACCACGTTGAT GAAGCTGACCACGCGCTGCGGTGAGGATGCGGTGGCCGGGCTCAATGAGGCGCTGCTGGCCAAGGCGGCCAGCGAAAAGC TGTTGCGCACCAACAAGGTCCGTGCCGACACCACCGTGGTGGAGGGCGATGTGGGCTATCCCACCGACACTGGACTGCTC GCCAAGGCGGTCGGCTCGATGGCGCGCACCGTGGCGCGGATCAAAGCCGCGGACGCGGGATCGGCGCCGCTCGGTGGGTC GTCGGGCCCGCGCGATCGCCTCCAAGCTGCGGTTACGCGGCGCGCAGCAACGCGATCAGGCGCAGGCCTTCGTGCGCCGG ATCACCGGGGAGCTAGCCGGGATCGCCGAGCAGGCGCTGACCGAGGCTGCCGCGGTGGTACGTAA
Upstream 100 bases:
>100_bases ACTAGGACCTGAAAAAGTCGGCGCGTTGTTCCTCGGTTGGTTGGCGCTGAGCTGGGAGGATGGCCTCAATGCCCTTGTTG CGGAAGGGATTGAGGCCATC
Downstream 100 bases:
>100_bases CGCCCAACGTGCGGTGCGCCGCGCCAGTGGGCGGCGCAAAGCCTGGCTACGCCAGGCCATCAACCATCTCGAGAAGCTGA TCGGACGCACCGAGCGGGTG
Product: putative transposase
Products: NA
Alternate protein names: LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Methyl-Accepting Chemotaxis Sensory Transducer; IS5 Family Transposase
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCR EVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLL AKAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT
Sequences:
>Translated_234_residues MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCR EVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLL AKAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT >Mature_234_residues MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCR EVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAGLNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLL AKAVGSMARTVARIKAADAGSAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT
Specific function: Unknown
COG id: COG3039
COG function: function code L; Transposase and inactivated derivatives, IS5 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25573; Mature: 25573
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH YLRLMFLKFRYRLGYESLCREVTDSITWRRFCRIPLEGSVPHPTTLMKLTTRCGEDAVAG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH LNEALLAKAASEKLLRTNKVRADTTVVEGDVGYPTDTGLLAKAVGSMARTVARIKAADAG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SAPLGGSSGPRDRLQAAVTRRAATRSGAGLRAPDHRGASRDRRAGADRGCRGGT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA