Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639078
Identifier: 121639078
GI number: 121639078
Start: 3518260
End: 3519159
Strand: Direct
Name: 121639078
Synonym: BCG_3218
Alternate gene names: NA
Gene position: 3518260-3519159 (Clockwise)
Preceding gene: 121639077
Following gene: 121639080
Centisome position: 80.43
GC content: 66.89
Gene sequence:
>900_bases GTGTCTGCTCGCAGTGTGGCACCGTCTCAGGTCATGCGGCGGGCTGCGTCTGCTCTGTATTCGTTGAATCCTGCGATGCC GGTGCTGCTAAGACCCGACGGTGCCGTGCAAGTGGGCTGGGATCCTCGTCGGGCTGTGCTCGTCCGTCCACCGCGTGGAT TAACCGCGACAGGTTTGGCCGCGCTGCTGCGGTCCATGCGATCACCGATACCAATCACCGAGTTGCAGCGCCAAGCCGCC GAGCGTGGATTGGTTGACGGTGACGCCATGGCGAACCTTGTCGCGCAACTGGTTGGCGCGGGTGTAGCGACCCCCCTAGC CAACCCCGGAAACCTGGATTCCCGGCGTCGCGCCGCGTCCATCCGGGTCCACGGTCGCGGGCCGTTGTCAGACCTGCTCG TCCAGGCGCTGCGCTGCTCCGGTGCCCGGATCAGGCACAGCAGCCAACCACATGCGGCGGTGACTCCCGCGGGCGTGGAT CTGGTGGTGTTGTCGGACTATCTGGTGGCCGATCCGCACATGGTGCGCGATCTGCACACCGAGAGAGTTCCGCATCTTCC CGTTCGGGTTCGTGACGGCACCGGGATGGTCGGGCCCCTGGTGGTCCCCGGCGTGACCAGCTGTCTCGGTTGCGCTGACC TGCATCGCAGCGACCGCGACGCCGCGTGGCCGGCCATCGCCGCCCAATTGCGGGACACCGTCGGGGTGGCCGACCGGGCC ACGTTGTTAGCGACGGCGGCGCTGGCGCTCAGCCAAGTGAACCGGGTGATCGCCGCCGTGCGTGGACAGGAGGCGACCCC TGAGCCCCCGTCGGCGCTGAACACCACCTTGGAGTTCGATCTCAACGCTGGCTCTATCGTGGCGCGACAATGGACCAGGC ATCCGCGGTGTTTTTGTTGA
Upstream 100 bases:
>100_bases GCGGTATCGACGAAGCGATCGCCGAACTCGAGCGGGACCAGCAGGCCCGCGGCGCCGACGACTCCGGCCACGATGGCGGT CCTGTGGATAACTGAGCGGT
Downstream 100 bases:
>100_bases CGTTACGTCTAACCCAGTCGTCCCTGCTCCGGCACGTTGGTCGAGATTGACGCATAGGCTCTGGCCAAGGTGTCGAGCAC GTCCTCTGTCAGGGTGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRPPRGLTATGLAALLRSMRSPIPITELQRQAA ERGLVDGDAMANLVAQLVGAGVATPLANPGNLDSRRRAASIRVHGRGPLSDLLVQALRCSGARIRHSSQPHAAVTPAGVD LVVLSDYLVADPHMVRDLHTERVPHLPVRVRDGTGMVGPLVVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRA TLLATAALALSQVNRVIAAVRGQEATPEPPSALNTTLEFDLNAGSIVARQWTRHPRCFC
Sequences:
>Translated_299_residues MSARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRPPRGLTATGLAALLRSMRSPIPITELQRQAA ERGLVDGDAMANLVAQLVGAGVATPLANPGNLDSRRRAASIRVHGRGPLSDLLVQALRCSGARIRHSSQPHAAVTPAGVD LVVLSDYLVADPHMVRDLHTERVPHLPVRVRDGTGMVGPLVVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRA TLLATAALALSQVNRVIAAVRGQEATPEPPSALNTTLEFDLNAGSIVARQWTRHPRCFC >Mature_298_residues SARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRPPRGLTATGLAALLRSMRSPIPITELQRQAAE RGLVDGDAMANLVAQLVGAGVATPLANPGNLDSRRRAASIRVHGRGPLSDLLVQALRCSGARIRHSSQPHAAVTPAGVDL VVLSDYLVADPHMVRDLHTERVPHLPVRVRDGTGMVGPLVVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRAT LLATAALALSQVNRVIAAVRGQEATPEPPSALNTTLEFDLNAGSIVARQWTRHPRCFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31646; Mature: 31515
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRPPRGLTATGLA CCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHH ALLRSMRSPIPITELQRQAAERGLVDGDAMANLVAQLVGAGVATPLANPGNLDSRRRAAS HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEE IRVHGRGPLSDLLVQALRCSGARIRHSSQPHAAVTPAGVDLVVLSDYLVADPHMVRDLHT EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCHHHCCCHHHHHHHH ERVPHLPVRVRDGTGMVGPLVVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRA HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHH TLLATAALALSQVNRVIAAVRGQEATPEPPSALNTTLEFDLNAGSIVARQWTRHPRCFC HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCC >Mature Secondary Structure SARSVAPSQVMRRAASALYSLNPAMPVLLRPDGAVQVGWDPRRAVLVRPPRGLTATGLA CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCCCEEEEECCCCCCHHHHH ALLRSMRSPIPITELQRQAAERGLVDGDAMANLVAQLVGAGVATPLANPGNLDSRRRAAS HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEE IRVHGRGPLSDLLVQALRCSGARIRHSSQPHAAVTPAGVDLVVLSDYLVADPHMVRDLHT EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCHHHCCCHHHHHHHH ERVPHLPVRVRDGTGMVGPLVVPGVTSCLGCADLHRSDRDAAWPAIAAQLRDTVGVADRA HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHH TLLATAALALSQVNRVIAAVRGQEATPEPPSALNTTLEFDLNAGSIVARQWTRHPRCFC HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCEEEEECCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA