Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121639077
Identifier: 121639077
GI number: 121639077
Start: 3516836
End: 3518254
Strand: Direct
Name: 121639077
Synonym: BCG_3217
Alternate gene names: NA
Gene position: 3516836-3518254 (Clockwise)
Preceding gene: 121639074
Following gene: 121639078
Centisome position: 80.39
GC content: 67.16
Gene sequence:
>1419_bases GTGAGTACCGGTGAGGTCATGGGTGACCTGCCTTTCGGCTTCTCTTCCGGAGACGACCCCCCGGAAGATCCGTCTGGGCG CGATAAGCGCGGGAAGGACGGTGCCGATTCCGGATCGGGCGCCAATCCGTTGGGCGCGTTCGGCATCGGTGGAGAATTCA ACATGGCCGACCTGGGGCAAATCTTCACCCGCCTAGGAGAGATGTTCGGCGGCGTCGGCACCGCGATGGCCGCGGGCAAA ACCTCAGGACCGGTCAACTACGACTTGGCCCGGCAGGTCGCGTCGAGCTCGATCGGGTTCATCGCGCCCATCCCGGCGGC CACGAACTCGGCGATCGCCGACGCGGTGCATCTGGCCGACACCTGGCTTGACGGGGCAACCTCGCTACCCGCTGGCGCCA CCAAGGCGGTGGGTTGGAGCCCCACCGACTGGGTCGACAACACCTTGGCTACCTGGAAACGGCTGTGCGATCCCATGGCC CAGCAGATCTCCACGGTCTGGGCGTCGTCGCTGCCGGAAGAGGCCAAGAGCATGGCCGGCCCGCTGCTGTCGATCATGTC GCAGATGGGCGGCATAGCGTTTGGTTCGCAACTGGGCCAAGCGCTGGGCCGGCTGTCCCGTGAGGTGCTGACGTCTACCG ACATCGGTCTACCGCTGGGGCCCAAGGGGGTGGCCGCAATACTGCCCGGCGCCGTCGAATCGTTTGCCGCCGGACTCGAG CAACCGCGCAGCGAGATTCTGACGTTCCTGGCCACCCGTGAGGCCGCACATCACCGCCTGTTCAGCCACGTTCCCTGGCT GGCCAGTCAACTGCTCGGCGCCGTCGAGGCCTACGCCATGGGCATGAAGATCGATATGACCGGAATCGAGGAGCTGGCCC GCGATATCAATCCGACGTCGCTGGCCGATCCCGCCGCCATGGAACAGCTGCTGAGCCAGGGAGTATTCGAGCCCAAGGCA ACGCCGGCCCAGACGCAGGCATTGGAACGACTCGAAACACTGCTCGCCCTGATCGAAGGCTGGGTGCAGACCGTGGTGAC TGCGGCGCTGGGCGAGCGAATTCCGGGTGAGGCAGCGCTCAGCGAAACGCTGCGCCGACGCCGAGCCAGTGGCGGCCCCG CCGAACAGACCTTTGCGACGTTGGTCGGGCTGGAGCTGCGGCCACGCAAACTGCGGGAGGCCGGAGCGCTGTGGGAGCGC CTCACCCGGGCCGTCGGCATGGACGCCCGCGACGCCGTCTGGCAGCACCCGGACCTGCTGCCCGCCACTGACGATCTCGA CGACCCGGCCGCCTTTATCGACCGTGTCATCGGCGGCGACACCAGCGGTATCGACGAAGCGATCGCCGAACTCGAGCGGG ACCAGCAGGCCCGCGGCGCCGACGACTCCGGCCACGATGGCGGTCCTGTGGATAACTGA
Upstream 100 bases:
>100_bases AAGGTCAATATCCGCCTATTCACGCCGCATACACTAGACGGACCTGGCCGGGCTGGTTCAGCTGCGAGCGTGACCGCTGA TCGCACCTTCTGTTCCCGCG
Downstream 100 bases:
>100_bases GCGGTGTGTCTGCTCGCAGTGTGGCACCGTCTCAGGTCATGCGGCGGGCTGCGTCTGCTCTGTATTCGTTGAATCCTGCG ATGCCGGTGCTGCTAAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MSTGEVMGDLPFGFSSGDDPPEDPSGRDKRGKDGADSGSGANPLGAFGIGGEFNMADLGQIFTRLGEMFGGVGTAMAAGK TSGPVNYDLARQVASSSIGFIAPIPAATNSAIADAVHLADTWLDGATSLPAGATKAVGWSPTDWVDNTLATWKRLCDPMA QQISTVWASSLPEEAKSMAGPLLSIMSQMGGIAFGSQLGQALGRLSREVLTSTDIGLPLGPKGVAAILPGAVESFAAGLE QPRSEILTFLATREAAHHRLFSHVPWLASQLLGAVEAYAMGMKIDMTGIEELARDINPTSLADPAAMEQLLSQGVFEPKA TPAQTQALERLETLLALIEGWVQTVVTAALGERIPGEAALSETLRRRRASGGPAEQTFATLVGLELRPRKLREAGALWER LTRAVGMDARDAVWQHPDLLPATDDLDDPAAFIDRVIGGDTSGIDEAIAELERDQQARGADDSGHDGGPVDN
Sequences:
>Translated_472_residues MSTGEVMGDLPFGFSSGDDPPEDPSGRDKRGKDGADSGSGANPLGAFGIGGEFNMADLGQIFTRLGEMFGGVGTAMAAGK TSGPVNYDLARQVASSSIGFIAPIPAATNSAIADAVHLADTWLDGATSLPAGATKAVGWSPTDWVDNTLATWKRLCDPMA QQISTVWASSLPEEAKSMAGPLLSIMSQMGGIAFGSQLGQALGRLSREVLTSTDIGLPLGPKGVAAILPGAVESFAAGLE QPRSEILTFLATREAAHHRLFSHVPWLASQLLGAVEAYAMGMKIDMTGIEELARDINPTSLADPAAMEQLLSQGVFEPKA TPAQTQALERLETLLALIEGWVQTVVTAALGERIPGEAALSETLRRRRASGGPAEQTFATLVGLELRPRKLREAGALWER LTRAVGMDARDAVWQHPDLLPATDDLDDPAAFIDRVIGGDTSGIDEAIAELERDQQARGADDSGHDGGPVDN >Mature_471_residues STGEVMGDLPFGFSSGDDPPEDPSGRDKRGKDGADSGSGANPLGAFGIGGEFNMADLGQIFTRLGEMFGGVGTAMAAGKT SGPVNYDLARQVASSSIGFIAPIPAATNSAIADAVHLADTWLDGATSLPAGATKAVGWSPTDWVDNTLATWKRLCDPMAQ QISTVWASSLPEEAKSMAGPLLSIMSQMGGIAFGSQLGQALGRLSREVLTSTDIGLPLGPKGVAAILPGAVESFAAGLEQ PRSEILTFLATREAAHHRLFSHVPWLASQLLGAVEAYAMGMKIDMTGIEELARDINPTSLADPAAMEQLLSQGVFEPKAT PAQTQALERLETLLALIEGWVQTVVTAALGERIPGEAALSETLRRRRASGGPAEQTFATLVGLELRPRKLREAGALWERL TRAVGMDARDAVWQHPDLLPATDDLDDPAAFIDRVIGGDTSGIDEAIAELERDQQARGADDSGHDGGPVDN
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49358; Mature: 49227
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGEVMGDLPFGFSSGDDPPEDPSGRDKRGKDGADSGSGANPLGAFGIGGEFNMADLGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IFTRLGEMFGGVGTAMAAGKTSGPVNYDLARQVASSSIGFIAPIPAATNSAIADAVHLAD HHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHH TWLDGATSLPAGATKAVGWSPTDWVDNTLATWKRLCDPMAQQISTVWASSLPEEAKSMAG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH PLLSIMSQMGGIAFGSQLGQALGRLSREVLTSTDIGLPLGPKGVAAILPGAVESFAAGLE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH QPRSEILTFLATREAAHHRLFSHVPWLASQLLGAVEAYAMGMKIDMTGIEELARDINPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCCCC LADPAAMEQLLSQGVFEPKATPAQTQALERLETLLALIEGWVQTVVTAALGERIPGEAAL CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SETLRRRRASGGPAEQTFATLVGLELRPRKLREAGALWERLTRAVGMDARDAVWQHPDLL HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC PATDDLDDPAAFIDRVIGGDTSGIDEAIAELERDQQARGADDSGHDGGPVDN CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure STGEVMGDLPFGFSSGDDPPEDPSGRDKRGKDGADSGSGANPLGAFGIGGEFNMADLGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IFTRLGEMFGGVGTAMAAGKTSGPVNYDLARQVASSSIGFIAPIPAATNSAIADAVHLAD HHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHH TWLDGATSLPAGATKAVGWSPTDWVDNTLATWKRLCDPMAQQISTVWASSLPEEAKSMAG HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH PLLSIMSQMGGIAFGSQLGQALGRLSREVLTSTDIGLPLGPKGVAAILPGAVESFAAGLE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH QPRSEILTFLATREAAHHRLFSHVPWLASQLLGAVEAYAMGMKIDMTGIEELARDINPTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCCCC LADPAAMEQLLSQGVFEPKATPAQTQALERLETLLALIEGWVQTVVTAALGERIPGEAAL CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH SETLRRRRASGGPAEQTFATLVGLELRPRKLREAGALWERLTRAVGMDARDAVWQHPDLL HHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC PATDDLDDPAAFIDRVIGGDTSGIDEAIAELERDQQARGADDSGHDGGPVDN CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA