Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121638090
Identifier: 121638090
GI number: 121638090
Start: 2452044
End: 2453582
Strand: Direct
Name: 121638090
Synonym: BCG_2225
Alternate gene names: NA
Gene position: 2452044-2453582 (Clockwise)
Preceding gene: 121638089
Following gene: 121638093
Centisome position: 56.05
GC content: 66.86
Gene sequence:
>1539_bases ATGCCCGCATCACGACTGGTCAGACAAGTGTCTGCGCCACGGAACCTGTTCGGGCGGCTGGTTGCCCAGGGGGGCTTCTA CACGGCCGGGCTGCAGTTGGGCAGCGGTGCGGTGGTACTGCCGGTCATCTGCGCACATCAGGGCCTCACCTGGGCGGCTG GGCTGTTGTATCCGGCGTTCTGCATTGGCGCCATTCTGGGAAATTCGCTGTCGCCGCTGATTCTGCAGCGCGCCGGCCAG CTCCGGCACCTGCTGATGGCGGCGATATCGGCGACGGCGGCGGCGCTGGTTGTGTGCAACGCTGCGGTCCCCTGGACTGG CGTTGGCGTCGCCGCGGTTTTTTTGGCGACCACGGGGGCCGGTGGTGTCGTCACCGGAGTCTCCAGCGTCGCCTACACCG ACATGATCTCCAGCATGTTGCCCGCGGTACGGCGGGGCGAGCTACTGCTCACCCAAGGTGCCGCGGGGTCGGTGCTGGCC ACCGGCGTCACATTGGTGATTGTGCCGATGCTGGCCCATGGCAACGAGATGGCGCGCTATCACGATCTGCTGTGGCTGGG CGCCGCAGGTCTGGTTTGCTCCGGCATCGCGGCGCTGTTCGTCGGCCCGATGCGGTCTGTGTCCGTCACAACCGCCACCC GAATGCCACTGCGGGAAATCTATTGGATGGGCTTCGCGATCGCCCGCTCCCAGCCGTGGTTTCGCCGGTATATGACGACT TACCTGCTGTTCGTTCCGATCAGCCTGGGCACCACGTTCTTCAGCCTGCGCGCCGCCCAGTCCAACGGCAGTCTGCACGT GCTGGTGATCCTTTCCAGCATTGGATTGGTCGTCGGTTCGATGCTGTGGCGACAGATAAACCGCCTGTTCGGGGTGCGTG GCCTGCTGCTGGGCAGCGCACTGCTCAACGCCGCTGCTGCGCTGCTGTGCATGGTGGCCGAGTCGTGTGGGCAGTGGGTT CACGCCTGGGCGTACGGCACGGCGTTCCTGCTGGCTACGGTGGCCGCTCAAACGGTGGTCGCCGCATCGATATCGTGGAT CAGCGTCCTCGCGCCCGAGCGGTACCGCGCCACCCTGATCTGCGTTGGGTCGACCTTGGCCGCCGTCGAAGCCACCGTGC TGGGAGTTGCGCTCGGCGGAATTGCCCAAAAGCATGCCACCATCTGGCCGGTTGTCGTCGTGCTGACACTGGCCGTAATC GCCGCGGTGGCGAGTCTGCGCGCACCGACACGAATCGGGGTGACGGCGGACACGAGCCCGCAAGCAGCGACCTTGCAAGC CTACCGCCCGGCCACTCCTAACCCCATCCATAGCGATGAACGTTCGACGCCGCCCGACCATCTCTCAGTCCGCCGCGGGC AGTTACGACACGTATGGGACAGTCGCCGGCCCGCGCCACCCCTGAACCGGCCAAGCTGTCGCCGCGCGGCCCGCCGTCCA GCGCCCGGCAAACCCGCTGCCGCACTACCCCAGCCGCGCCATCCAGCCGTGGGTGTCCGCGAAGGTGCCCCGCTGGATGC CGGTCAGCGTATCGCGTAG
Upstream 100 bases:
>100_bases GCTCCCCTCCGTGTCCCCAGATTAGGGGACATGAAATTCAACCGACGGTGTCCGATTGGCGGATCGTTTTGGCCGCGCGG CATATATAGCGTCGTTAATC
Downstream 100 bases:
>100_bases TGCCATGGTCACCTCACCCGGCTGACCGTCGGCGATTCTGAACTCGCTGGCACCGTGCCGCACCCGCGCGACCGGGGTGA TGACAGCGGCGGTGCCGCAC
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNSLSPLILQRAGQ LRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLA TGVTLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWV HAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVI AAVASLRAPTRIGVTADTSPQAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP APGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Sequences:
>Translated_512_residues MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNSLSPLILQRAGQ LRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLA TGVTLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWV HAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVI AAVASLRAPTRIGVTADTSPQAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP APGKPAAALPQPRHPAVGVREGAPLDAGQRIA >Mature_511_residues PASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAFCIGAILGNSLSPLILQRAGQL RHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGAGGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLAT GVTLVIVPMLAHGNEMARYHDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTTY LLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSALLNAAAALLCMVAESCGQWVH AWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLICVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIA AVASLRAPTRIGVTADTSPQAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRPA PGKPAAALPQPRHPAVGVREGAPLDAGQRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2209_MYCTU (P64953)
Other databases:
- EMBL: BX842579 - EMBL: AE000516 - PIR: B70786 - RefSeq: NP_216725.1 - RefSeq: NP_336737.1 - ProteinModelPortal: P64953 - EnsemblBacteria: EBMYCT00000001399 - EnsemblBacteria: EBMYCT00000069247 - GeneID: 887230 - GeneID: 924160 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2265 - KEGG: mtu:Rv2209 - TIGR: MT2265 - TubercuList: Rv2209 - GeneTree: EBGT00050000018700 - HOGENOM: HBG569379 - OMA: CHASAHR - ProtClustDB: CLSK790378 - InterPro: IPR016196
Pfam domain/function: SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 53580; Mature: 53448
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16928b14)-; HASH(0x1716d098)-; HASH(0x1425dff0)-; HASH(0x16e3dd9c)-; HASH(0x16d2a644)-; HASH(0x16f145c4)-; HASH(0x16705fa8)-; HASH(0x169083e4)-; HASH(0x1578a984)-; HASH(0x17130f5c)-; HASH(0x16d46fb4)-; HASH(0x170f3e9c)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF CCHHHHHHHHCCHHHHHHHHHHCCCEEEECEEECCCCCHHHHHHHCCCCHHHHHHHHHHH CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA HHHHHHHHHCCHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCC QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP CCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC APGKPAAALPQPRHPAVGVREGAPLDAGQRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure PASRLVRQVSAPRNLFGRLVAQGGFYTAGLQLGSGAVVLPVICAHQGLTWAAGLLYPAF CHHHHHHHHCCHHHHHHHHHHCCCEEEECEEECCCCCHHHHHHHCCCCHHHHHHHHHHH CIGAILGNSLSPLILQRAGQLRHLLMAAISATAAALVVCNAAVPWTGVGVAAVFLATTGA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC GGVVTGVSSVAYTDMISSMLPAVRRGELLLTQGAAGSVLATGVTLVIVPMLAHGNEMARY CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHH HDLLWLGAAGLVCSGIAALFVGPMRSVSVTTATRMPLREIYWMGFAIARSQPWFRRYMTT HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH YLLFVPISLGTTFFSLRAAQSNGSLHVLVILSSIGLVVGSMLWRQINRLFGVRGLLLGSA HHHHHHHHHCCHHHHEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNAAAALLCMVAESCGQWVHAWAYGTAFLLATVAAQTVVAASISWISVLAPERYRATLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE CVGSTLAAVEATVLGVALGGIAQKHATIWPVVVVLTLAVIAAVASLRAPTRIGVTADTSP EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECEECCCCC QAATLQAYRPATPNPIHSDERSTPPDHLSVRRGQLRHVWDSRRPAPPLNRPSCRRAARRP CCHHHEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCC APGKPAAALPQPRHPAVGVREGAPLDAGQRIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036