Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is dosT [H]
Identifier: 121637913
GI number: 121637913
Start: 2256439
End: 2258160
Strand: Reverse
Name: dosT [H]
Synonym: BCG_2046c
Alternate gene names: 121637913
Gene position: 2258160-2256439 (Counterclockwise)
Preceding gene: 121637914
Following gene: 121637912
Centisome position: 51.62
GC content: 65.45
Gene sequence:
>1722_bases GTGACACACCCTGACAGGGCGAACGTTAACCCTGGCAGCCCGCCAGTGCGCGAGACACTGTCGCAGCTTCGGTTGCGAGA GCTGCTGCTGGAAGTCCAAGACCGGATTGAACAGATCGTCGAAGGCCGCGACCGGCTGGATGGTCTGATCGACGCCATCT TGGCGATCACATCGGGACTCAAGCTCGACGCCACCCTGCGCGCCATTGTGCATACCGCCGCCGAGTTGGTGGATGCCCGC TACGGGGCGCTCGGGGTGCGCGGTTACGACCATAGATTGGTCGAATTCGTCTACGAGGGGATCGACGAAGAGACCCGGCA CCTCATCGGCTCATTGCCGGAGGGGCGAGGTGTTCTCGGCGCGCTGATCGAGGAGCCAAAGCCGATCCGGCTGGACGATA TCTCGCGGCATCCCGCATCGGTTGGATTTCCGCTGCACCATCCGCCGATGCGGACCTTCCTCGGGGTTCCAGTGCGCATC CGCGACGAGGTGTTCGGCAATCTTTACTTGACCGAGAAGGCAGATGGCCAGCCGTTCAGCGATGACGACGAGGTGCTGGT GCAGGCGCTGGCCGCCGCGGCCGGGATTGCCGTTGACAATGCCCGTCTCTTCGAGGAATCACGGACCCGGGAAGCGTGGA TCGAGGCAACCCGCGACATCGGAACGCAGATGCTGGCCGGTGCGGACCCGGCCATGGTGTTTCGGCTCATCGCCGAGGAA GCGTTGACGTTGATGGCTGGGGCAGCCACCTTGGTGGCGGTGCCGCTCGACGACGAAGCGCCGGCTTGCGAGGTCGACGA CCTGGTCATCGTAGAGGTGGCCGGAGAGATCTCCCCGGCGGTCAAGCAAATGACGGTTGCCGTCAGCGGAACGTCGATCG GGGGAGTCTTTCACGACCGTACGCCCCGCCGGTTCGACCGGCTTGACCTCGCGGTCGACGGCCCGGTGGAGCCCGGGCCC GCCCTGGTGCTGCCGCTGCGTGCCGCCGACACTGTTGCCGGTGTGCTGGTCGCACTTCGCAGTGCCGATGAACAGCCGTT CAGCGACAAACAGCTCGATATGATGGCCGCCTTCGCTGACCAGGCTGCGCTCGCCTGGCGGCTGGCGACCGCGCAGCGAC AGATGCGAGAAGTGGAGATCCTGACCGATCGCGACCGGATCGCACGTGATCTGCATGACCACGTCATCCAGCGGCTCTTC GCAGTCGGGCTCACCCTGCAGGGTGCCGCTCCGCGAGCACGTGTCCCCGCCGTCCGGGAATCCATCTACAGCAGCATCGA CGATCTCCAGGAAATCATTCAGGAGATTCGATCTGCGATCTTCGACCTACACGCCGGGCCCTCCCGGGCGACGGGTCTGC GCCACCGACTGGACAAGGTCATCGACCAACTCGCGATCCCCGCGCTGCACACCACGGTCCAGTACACGGGCCCGCTGTCC GTTGTCGACACCGTCCTGGCCAACCACGCCGAAGCGGTTCTGCGGGAGGCGGTTAGCAACGCTGTCCGGCACGCGAACGC GACCAGCCTGGCCATCAACGTCAGCGTCGAGGATGATGTGCGGGTCGAGGTCGTCGACGACGGTGTCGGCATCTCCGGCG ACATCACCGAAAGCGGCCTGCGCAATCTCCGCCAGCGTGCCGACGACGCGGGCGGCGAATTCACAGTCGAGAACATGCCG ACCGGAGGCACCTTGCTGCGGTGGTCTGCACCGCTGCGCTGA
Upstream 100 bases:
>100_bases CGGCTGCACCCTGCTGGTCGTCGGTCAGCAGTATCTGTGACTGTGCCGCTGGGTAGCCAGACCAGTTGGTTGAGCGCAGC TCCGGTGTCAACATAGCTAT
Downstream 100 bases:
>100_bases TGGATTGATGGACTGTGTTCCGACCGCAAGGAGCGTGAAATGTCTGCTGCGACAGCGAAATACGGAATACTCGTTGGCGT CGACGGATCAGCGCAATCCA
Product: histidine kinase response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MTHPDRANVNPGSPPVRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGLKLDATLRAIVHTAAELVDAR YGALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLGALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRI RDEVFGNLYLTEKADGQPFSDDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEE ALTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDRTPRRFDRLDLAVDGPVEPGP ALVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFADQAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLF AVGLTLQGAAPRARVPAVRESIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLS VVDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGLRNLRQRADDAGGEFTVENMP TGGTLLRWSAPLR
Sequences:
>Translated_573_residues MTHPDRANVNPGSPPVRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGLKLDATLRAIVHTAAELVDAR YGALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLGALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRI RDEVFGNLYLTEKADGQPFSDDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEE ALTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDRTPRRFDRLDLAVDGPVEPGP ALVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFADQAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLF AVGLTLQGAAPRARVPAVRESIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLS VVDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGLRNLRQRADDAGGEFTVENMP TGGTLLRWSAPLR >Mature_572_residues THPDRANVNPGSPPVRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGLKLDATLRAIVHTAAELVDARY GALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLGALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRIR DEVFGNLYLTEKADGQPFSDDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEEA LTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDRTPRRFDRLDLAVDGPVEPGPA LVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFADQAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLFA VGLTLQGAAPRARVPAVRESIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLSV VDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGLRNLRQRADDAGGEFTVENMPT GGTLLRWSAPLR
Specific function: Interacts with the two-component regulatory system devR/devS (dosR/dosS) involved in onset of the dormancy response. May act as a direct hypoxia sensor (rather than a redox sensor); the normal state is the oxygenated form, while the deoxy form is probably
COG id: COG2203
COG function: function code T; FOG: GAF domain
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788812, Length=270, Percent_Identity=27.037037037037, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1787474, Length=259, Percent_Identity=24.7104247104247, Blast_Score=66, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 [H]
Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: 2.7.3.- [C]
Molecular weight: Translated: 62155; Mature: 62024
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPDRANVNPGSPPVRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLDATLRAIVHTAAELVDARYGALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLG CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH ALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRIRDEVFGNLYLTEKADGQPFS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHCCCEEEEECCCCCCCC DDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEE CCHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDR HHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCC TPRRFDRLDLAVDGPVEPGPALVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFAD CCCHHHHCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLFAVGLTLQGAAPRARVPAVRE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHH SIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHH VVDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHH RNLRQRADDAGGEFTVENMPTGGTLLRWSAPLR HHHHHHHCCCCCEEEECCCCCCCEEEEECCCCC >Mature Secondary Structure THPDRANVNPGSPPVRETLSQLRLRELLLEVQDRIEQIVEGRDRLDGLIDAILAITSGL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KLDATLRAIVHTAAELVDARYGALGVRGYDHRLVEFVYEGIDEETRHLIGSLPEGRGVLG CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH ALIEEPKPIRLDDISRHPASVGFPLHHPPMRTFLGVPVRIRDEVFGNLYLTEKADGQPFS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEHHHHCCCEEEEECCCCCCCC DDDEVLVQALAAAAGIAVDNARLFEESRTREAWIEATRDIGTQMLAGADPAMVFRLIAEE CCHHHHHHHHHHHHCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ALTLMAGAATLVAVPLDDEAPACEVDDLVIVEVAGEISPAVKQMTVAVSGTSIGGVFHDR HHHHHHCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHEEEEEECCCCCCCCCCC TPRRFDRLDLAVDGPVEPGPALVLPLRAADTVAGVLVALRSADEQPFSDKQLDMMAAFAD CCCHHHHCCEEECCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QAALAWRLATAQRQMREVEILTDRDRIARDLHDHVIQRLFAVGLTLQGAAPRARVPAVRE HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHH SIYSSIDDLQEIIQEIRSAIFDLHAGPSRATGLRHRLDKVIDQLAIPALHTTVQYTGPLS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHEEECCCHH VVDTVLANHAEAVLREAVSNAVRHANATSLAINVSVEDDVRVEVVDDGVGISGDITESGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCHHHH RNLRQRADDAGGEFTVENMPTGGTLLRWSAPLR HHHHHHHCCCCCEEEECCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]