Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is cfp17
Identifier: 121637730
GI number: 121637730
Start: 2073607
End: 2074095
Strand: Direct
Name: cfp17
Synonym: BCG_1862
Alternate gene names: NA
Gene position: 2073607-2074095 (Clockwise)
Preceding gene: 121637729
Following gene: 121637731
Centisome position: 47.4
GC content: 62.58
Gene sequence:
>489_bases GTGACGGACATGAACCCGGATATTGAGAAGGACCAGACCTCCGATGAAGTCACGGTAGAGACGACCTCCGTCTTCCGCGC AGACTTCCTCAGCGAGCTGGACGCTCCTGCGCAAGCGGGTACGGAGAGCGCGGTCTCCGGGGTGGAAGGGCTCCCGCCGG GCTCGGCGTTGCTGGTAGTCAAACGAGGCCCCAACGCCGGGTCCCGGTTCCTACTCGACCAAGCCATCACGTCGGCTGGT CGGCATCCCGACAGCGACATATTTCTCGACGACGTGACCGTGAGCCGTCGCCATGCTGAATTCCGGTTGGAAAACAACGA ATTCAATGTCGTCGATGTCGGGAGTCTCAACGGCACCTACGTCAACCGCGAGCCCGTGGATTCGGCGGTGCTGGCGAACG GCGACGAGGTCCAGATCGGCAAGTTCCGGTTGGTGTTCTTGACCGGACCCAAGCAAGGCGAGGATGACGGGAGTACCGGG GGCCCGTGA
Upstream 100 bases:
>100_bases CGAGAAAGTAGTAAGGGCGATAATAGGCGGTAAAGAGTAGCGGGAAGCCGGCCGAACGACTCGGTCAGACAACGCCACAG CGGCCAGTGAGGAGCAGCGG
Downstream 100 bases:
>100_bases GCGCACCCGATAGCCCCGCGCTGGCCGGGATGTCGATCGGGGCGGTCCTCGACCTGCTACGACCGGATTTTCCTGATGTC ACCATCTCCAAGATTCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAG RHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG GP
Sequences:
>Translated_162_residues MTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAG RHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTG GP >Mature_161_residues TDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVVKRGPNAGSRFLLDQAITSAGR HPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGG P
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FHA domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1827_MYCTU (P64897)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: D70721 - RefSeq: NP_216343.1 - RefSeq: NP_336334.1 - PDB: 2KFU - PDBsum: 2KFU - ProteinModelPortal: P64897 - SMR: P64897 - MINT: MINT-6804207 - PhosSite: P64897 - EnsemblBacteria: EBMYCT00000002261 - EnsemblBacteria: EBMYCT00000071956 - GeneID: 885735 - GeneID: 923260 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1875 - KEGG: mtu:Rv1827 - TIGR: MT1875 - TubercuList: Rv1827 - GeneTree: EBGT00050000015076 - HOGENOM: HBG707994 - OMA: HAEFRRE - ProtClustDB: CLSK791416 - InterPro: IPR000253 - InterPro: IPR008984 - Gene3D: G3DSA:2.60.200.20 - SMART: SM00240
Pfam domain/function: PF00498 FHA; SSF49879 SMAD_FHA
EC number: NA
Molecular weight: Translated: 17251; Mature: 17120
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV CCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEE KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY ECCCCCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCEEEEEECCCEEEEEECCCCCEE VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP ECCCCCCCCEECCCCEEEECEEEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure TDMNPDIEKDQTSDEVTVETTSVFRADFLSELDAPAQAGTESAVSGVEGLPPGSALLVV CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCEEEEE KRGPNAGSRFLLDQAITSAGRHPDSDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTY ECCCCCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCEEEEEECCCEEEEEECCCCCEE VNREPVDSAVLANGDEVQIGKFRLVFLTGPKQGEDDGSTGGP ECCCCCCCCEECCCCEEEECEEEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036