Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121637727
Identifier: 121637727
GI number: 121637727
Start: 2071665
End: 2072030
Strand: Direct
Name: 121637727
Synonym: BCG_1859
Alternate gene names: NA
Gene position: 2071665-2072030 (Clockwise)
Preceding gene: 121637726
Following gene: 121637728
Centisome position: 47.36
GC content: 63.11
Gene sequence:
>366_bases ATGGGGAGCGATACGGCCTGGAGTCCGGCGCGCATGATCGGGATCGCGGCGCTCGCCGTTGGAATCGTGCTGGGTTTGGT TTTCCATCCCGGCGTGCCAGAGGTCATCCAGCCGTATCTGCCGATCGCGGTGGTCGCCGCGCTCGACGCGGTGTTCGGTG GCTTGCGCGCCTATCTCGAGCGGATCTTTGACCCGAAGGTCTTCGTGGTTTCGTTCGTGTTCAACGTTTTGGTGGCTGCC CTAATCGTCTATGTCGGTGACCAACTGGGCGTCGGCACACAGTTGTCCACCGCGATCATCGTCGTGCTGGGCATCCGCAT CTTCGGCAACACCGCGGCCTTGCGGCGGCGGTTGTTCGGAGCGTGA
Upstream 100 bases:
>100_bases GTCGGCGACGGTCTGGCATTGCCTGCCGGTGCGACCCGGGATGTCAAGTTCGCCAAACAGATTGGGCCCTAGTGAGAGAA GTCCTGGTGAATAGGAAACC
Downstream 100 bases:
>100_bases CGGAGATGAGATCACCGTGAGTGAGAATCGCCCAGAACCCGTGGCAGCCGAGACTTCCGCCGCCACAACTGCGCGTCACT CCCAAGCCGACGCGGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAA LIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA
Sequences:
>Translated_121_residues MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAA LIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA >Mature_120_residues GSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLERIFDPKVFVVSFVFNVLVAAL IVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFGA
Specific function: Unknown
COG id: COG3856
COG function: function code S; Uncharacterized conserved protein (small basic protein)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sbp family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1824_MYCTU (P64893)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: A70721 - RefSeq: NP_216340.1 - RefSeq: NP_336331.1 - EnsemblBacteria: EBMYCT00000003213 - EnsemblBacteria: EBMYCT00000071862 - GeneID: 885719 - GeneID: 923643 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1872 - KEGG: mtu:Rv1824 - TIGR: MT1872 - TubercuList: Rv1824 - GeneTree: EBGT00050000015977 - HOGENOM: HBG430741 - OMA: FGVRLFQ - ProtClustDB: CLSK871967 - InterPro: IPR009709 - PIRSF: PIRSF018579
Pfam domain/function: PF06947 DUF1290
EC number: NA
Molecular weight: Translated: 12750; Mature: 12619
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16571800)-; HASH(0x1657f040)-; HASH(0x166e5db4)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFG HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC A H >Mature Secondary Structure GSDTAWSPARMIGIAALAVGIVLGLVFHPGVPEVIQPYLPIAVVAALDAVFGGLRAYLE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIFDPKVFVVSFVFNVLVAALIVYVGDQLGVGTQLSTAIIVVLGIRIFGNTAALRRRLFG HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCC A H
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036