Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637728
Identifier: 121637728
GI number: 121637728
Start: 2072047
End: 2072925
Strand: Direct
Name: 121637728
Synonym: BCG_1860
Alternate gene names: NA
Gene position: 2072047-2072925 (Clockwise)
Preceding gene: 121637727
Following gene: 121637729
Centisome position: 47.37
GC content: 62.46
Gene sequence:
>879_bases GTGAGTGAGAATCGCCCAGAACCCGTGGCAGCCGAGACTTCCGCCGCCACAACTGCGCGTCACTCCCAAGCCGACGCGGG CGCTCACGACGCCGTGCGACGTGGTCGTCACGAACTACCAGCCGACCATCCGCGCTCCAAGGTCGGACCGCTGCGGCGGA CAAGATTGACCGAAATACTGCGGGGTGGTCGCTCGCGTCTGGTGTTCGGGACGCTTGCGATCTTGTTGTGCTTGGTTCTG GGGGTTGCCATAGTCACTCAGGTCCGTCAGACCGACTCCGGTGATTCATTGGAAACAGCCCGTCCTGCAGACCTATTGGT GTTGTTGGATTCGTTGCGGCAACGCGAGGCCACGTTGAACGCCGAAGTGATCGACCTTCAGAACACGCTGAACGCGTTGC AGGCATCCGGCAACACCGATCAGGCAGCGTTAGAAAGCGCCCAGGCTAGATTGGCCGCGTTGTCCATCCTGGTCGGCGCC GTGGGTGCCACCGGGCCGGGCGTCATGATAACGATCGACGATCCGGGACCCGGAGTAGCGCCTGAGGTGATGATCGACGT GATCAACGAACTGCGTGCCGCTGGAGCCGAGGCGATCCAGATCAACGATGCACACCGGTCGGTGCGGGTCGGGGTTGACA CCTGGGTTGTCGGTGTGCCCGGCTCACTGACAGTCGACACCAAGGTCCTGTCCCCGCCGTATTCGATTCTGGCGATTGGT GATCCTCCAACGCTGGCCGCGGCGATGAACATTCCTGGTGGTGCACAGGACGGTGTCAAACGCGTCGGCGGGCGGATGGT TGTGCAGCAGGCCGACCGTGTGGACGTGACCGCCTTGCGGCAACCAAAACAGCACCAATACGCTCAGCCCGTCAAGTGA
Upstream 100 bases:
>100_bases TTGTCCACCGCGATCATCGTCGTGCTGGGCATCCGCATCTTCGGCAACACCGCGGCCTTGCGGCGGCGGTTGTTCGGAGC GTGACGGAGATGAGATCACC
Downstream 100 bases:
>100_bases ACTAGCCCAACTCCGAGCCGACCAGAATAGGATTACCGTGAGCGATATCCCGTCCGATCTGCACTACACCGCCGAACACG AGTGGATTCGCCGCAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVL GVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGA VGATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIG DPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK
Sequences:
>Translated_292_residues MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVL GVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGA VGATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIG DPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK >Mature_291_residues SENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVLG VAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAV GATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIGD PPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1825_MYCTU (P64895)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: B70721 - RefSeq: NP_216341.1 - RefSeq: NP_336332.1 - PDB: 3GMG - PDBsum: 3GMG - EnsemblBacteria: EBMYCT00000002136 - EnsemblBacteria: EBMYCT00000070057 - GeneID: 885726 - GeneID: 923724 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1873 - KEGG: mtu:Rv1825 - TIGR: MT1873 - TubercuList: Rv1825 - GeneTree: EBGT00050000016117 - HOGENOM: HBG672211 - OMA: PRQYAQP - ProtClustDB: CLSK791415 - InterPro: IPR010273
Pfam domain/function: PF05949 DUF881
EC number: NA
Molecular weight: Translated: 30645; Mature: 30514
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x16722aa8)-; HASH(0x15b761d4)-; HASH(0x161effac)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEIL CCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHH RGGRSRLVFGTLAILLCLVLGVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC AEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPGVA HHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC PEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIG HHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEECCCCEEECCEECCCCCEEEEEC DPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK CCCCEEEEECCCCCCHHHHHHHCCHHEEHHCCCCCHHHHCCCHHHCCCCCCH >Mature Secondary Structure SENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEIL CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHH RGGRSRLVFGTLAILLCLVLGVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLN HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC AEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPGVA HHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC PEVMIDVINELRAAGAEAIQINDAHRSVRVGVDTWVVGVPGSLTVDTKVLSPPYSILAIG HHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEEEEECCCCEEECCEECCCCCEEEEEC DPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK CCCCEEEEECCCCCCHHHHHHHCCHHEEHHCCCCCHHHHCCCHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036