Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121637726
Identifier: 121637726
GI number: 121637726
Start: 2070713
End: 2071636
Strand: Direct
Name: 121637726
Synonym: BCG_1858
Alternate gene names: NA
Gene position: 2070713-2071636 (Clockwise)
Preceding gene: 121637725
Following gene: 121637727
Centisome position: 47.34
GC content: 67.1
Gene sequence:
>924_bases GTGGCTGAGTCTGACCGGCTGCTCGGCGGCTACGACCCCAACGCCGGCTACAGCGCCCACGCAGGGGCGCAGCCACAACG CATCCCGGTTCCGTCGTTGCTGCGCGCGCTGCTATCAGAGCATCTGGATGCTGGATACGCGGCGGTTGCCGCCGAGCGCG AGCGTGCTGCGGCACCACGGTGTTGGCAAGCCCGCGCCGTCAGCTGGATGTGGCAGGCATTGGCCGCGACCCTAGTCGCC GCCGTGTTCGCTGCCGCGGTAGCGCAGGCGCGCTCGGTGGCACCCGGCGTGCGCGCCGCCCAACAGTTGCTCGTTGCGAG TGTGCGATCAACCCAGGCCGCCGCGACCACGTTGGCTCAACGGCGCAGCACACTCTCGGCGAAAGTCGACGACGTGCGGC GGATCGTACTCGCAGACGACGCCGAGGGACAGCGGCTGCTGGCCCGTCTCGACGTGCTTAGCCTGGCCGCGGCCAGCGCA CCGGTTGTCGGGCCTGGTCTGACGGTGACCGTGACCGATCCCGGTGCGAGCCCTAATCTTTCCGACGTGTCCAAGCAGCG GGTCAGCGGTAGCCAGCAAATCATCCTCGACCGCGATTTGCAGCTCGTCGTCAACTCACTGTGGGAAAGTGGCGCCGAGG CCATCTCGATCGATGGCGTCCGGATCGGGCCGAACGTCACGATCCGGCAAGCCGGCGGAGCAATCTTGGTCGACAATAAT CCCACGAGTAGTCCCTACACCATCTTGGCGGTCGGGCCGCCACATGCCATGCAGGACGTCTTCGATCGCAGCGCCGGGCT GTACCGCCTGCGGCTGCTGGAGACCTCCTACGGTGTCGGCGTCAGTGTGAACGTCGGCGACGGTCTGGCATTGCCTGCCG GTGCGACCCGGGATGTCAAGTTCGCCAAACAGATTGGGCCCTAG
Upstream 100 bases:
>100_bases GCCTTCGTGCTGTATGCAGTGCAGATGACGATGGTGGTGCGGCAGATGCCTAAGCTCAAGGGCAGGGCTCATCGGCCGGC GGCCCAGAACGCTGGTGAAC
Downstream 100 bases:
>100_bases TGAGAGAAGTCCTGGTGAATAGGAAACCATGGGGAGCGATACGGCCTGGAGTCCGGCGCGCATGATCGGGATCGCGGCGC TCGCCGTTGGAATCGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPRCWQARAVSWMWQALAATLVA AVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASA PVVGPGLTVTVTDPGASPNLSDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNN PTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVKFAKQIGP
Sequences:
>Translated_307_residues MAESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPRCWQARAVSWMWQALAATLVA AVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASA PVVGPGLTVTVTDPGASPNLSDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNN PTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVKFAKQIGP >Mature_306_residues AESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPRCWQARAVSWMWQALAATLVAA VFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQRRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASAP VVGPGLTVTVTDPGASPNLSDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNNP TSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVKFAKQIGP
Specific function: Unknown
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1823_MYCTU (P64891)
Other databases:
- EMBL: BX842577 - EMBL: AE000516 - PIR: H70720 - RefSeq: NP_216339.1 - RefSeq: NP_336330.1 - ProteinModelPortal: P64891 - EnsemblBacteria: EBMYCT00000001548 - EnsemblBacteria: EBMYCT00000070167 - GeneID: 885547 - GeneID: 923326 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT1871 - KEGG: mtu:Rv1823 - TIGR: MT1871 - TubercuList: Rv1823 - GeneTree: EBGT00050000016116 - HOGENOM: HBG565184 - OMA: NRHEAGA - ProtClustDB: CLSK791413 - InterPro: IPR010273
Pfam domain/function: PF05949 DUF881
EC number: NA
Molecular weight: Translated: 31936; Mature: 31804
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1250decc)-; HASH(0x162863a0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC CWQARAVSWMWQALAATLVAAVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGASPNL HHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCH SDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNN HHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEECCCEEEEECCCEEEECCC PTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVK CCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCEECCCCCCCCHH FAKQIGP HHHHCCH >Mature Secondary Structure AESDRLLGGYDPNAGYSAHAGAQPQRIPVPSLLRALLSEHLDAGYAAVAAERERAAAPR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC CWQARAVSWMWQALAATLVAAVFAAAVAQARSVAPGVRAAQQLLVASVRSTQAAATTLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RRSTLSAKVDDVRRIVLADDAEGQRLLARLDVLSLAAASAPVVGPGLTVTVTDPGASPNL HHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCH SDVSKQRVSGSQQIILDRDLQLVVNSLWESGAEAISIDGVRIGPNVTIRQAGGAILVDNN HHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCEEEECCEEECCCEEEEECCCEEEECCC PTSSPYTILAVGPPHAMQDVFDRSAGLYRLRLLETSYGVGVSVNVGDGLALPAGATRDVK CCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCEECCCCCCCCHH FAKQIGP HHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036