Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is ribG [H]
Identifier: 121637339
GI number: 121637339
Start: 1609982
End: 1611001
Strand: Direct
Name: ribG [H]
Synonym: BCG_1470
Alternate gene names: 121637339
Gene position: 1609982-1611001 (Clockwise)
Preceding gene: 121637338
Following gene: 121637342
Centisome position: 36.8
GC content: 67.94
Gene sequence:
>1020_bases ATGAACGTGGAGCAGGTCAAGAGCATCGACGAGGCTATGGGTCTCGCCATCGAGCACTCCTACCAGGTCAAAGGCACGAC TTATCCAAACCCCCCAGTGGGGGCCGTCATTGTGGATCCCAACGGTCGGATCGTCGGCGCCGGCGGCACCGAGCCGGCCG GTGGCGATCATGCCGAGGTGGTGGCGCTGCGCCGGGCCGGCGGATTGGCTACCGGCGCCATCGTGGTGGTCACCATGGAA CCCTGTAACCACTACGGCAAGACTCCGCCATGCGTGAACGCTCTGATCGAAGCCAGGGTGGGGACGGTGGTCTACGCCGT CGCCGACCCGAACGGGATCGCTGGGGGTGGCGCGGGCCGGCTGTCAGCAGCGGGCCTACAGGTGCGGTCCGGGGTGTTGG CTGAACAGGTGGCGGCCGGACCGCTGCGGGAGTGGCTCCACAAGCAACGCACCGGTCTGCCGCATGTCACCTGGAAGTAC GCCACCAGCATCGACGGCCGCAGCGCCGCCGCCGACGGCTCCAGCCAGTGGATCTCCAGCGAGGCCGCACGCCTGGATCT GCATCGCCGCCGCGCCATCGCCGACGCGATCTTGGTCGGCACCGGCACCGTCCTCGCCGACGACCCGGCCCTGACCGCGC GGCTGGCCGACGGCTCGCTGGCGCCGCAGCAGCCGCTGCGCGTGGTGGTGGGCAAGCGCGACATACCGCCGGAAGCACGG GTCCTCAACGACGAGGCACGCACCATGATGATCCGCACCCACGAACCTATGGAGGTGCTCAGGGCGTTGTCGGATCGCAC CGACGTGCTGCTGGAAGGAGGTCCCACCCTCGCCGGCGCCTTCCTACGAGCGGGTGCGATCAACCGGATCCTGGCCTACG TCGCACCGATCCTGTTGGGCGGTCCGGTTACCGCGGTCGATGACGTCGGGGTGTCCAACATCACCAACGCGTTGCGTTGG CAGTTCGACAGCGTCGAAAAGGTCGGACCGGATCTGTTGCTGAGCTTGGTGGCTCGTTAG
Upstream 100 bases:
>100_bases GCTTTGTCGCCGGATCGGCGGTGTACGGCGCCGATGACCCGGCCGCGGCGGTTGCGGCACTACGGCGACAGGCCGGTGCC GCCTCACTCCACCTGAGCCT
Downstream 100 bases:
>100_bases AGCGGCTCCACTTGGGGCGCCAGGGTCGGTTGCTCCTGGACTTCCGGTTCATCGGCATGTTCCTTGCGGCCGCTGATCAA CAGACCTAGCACCGCGCCGA
Product: putative bifunctional riboflavin biosynthesis protein RIBG: diaminohydroxyphosphoribosylaminopyrimidine deaminase + 5-amino-6-(5-phosphoribosylamino) uracil reductase
Products: NA
Alternate protein names: Diaminohydroxyphosphoribosylaminopyrimidine deaminase; DRAP deaminase; Riboflavin-specific deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase; HTP reductase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLATGAIVVVTME PCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKY ATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRW QFDSVEKVGPDLLLSLVAR
Sequences:
>Translated_339_residues MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLATGAIVVVTME PCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKY ATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRW QFDSVEKVGPDLLLSLVAR >Mature_339_residues MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEVVALRRAGGLATGAIVVVTME PCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGRLSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKY ATSIDGRSAAADGSSQWISSEAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLGGPVTAVDDVGVSNITNALRW QFDSVEKVGPDLLLSLVAR
Specific function: Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate [H]
COG id: COG1985
COG function: function code H; Pyrimidine reductase, riboflavin biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the HTP reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786616, Length=364, Percent_Identity=39.8351648351648, Blast_Score=228, Evalue=5e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016192 - InterPro: IPR002125 - InterPro: IPR016193 - InterPro: IPR004794 - InterPro: IPR011549 - InterPro: IPR002734 [H]
Pfam domain/function: PF00383 dCMP_cyt_deam_1; PF01872 RibD_C [H]
EC number: =3.5.4.26; =1.1.1.193 [H]
Molecular weight: Translated: 35383; Mature: 35383
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00903 CYT_DCMP_DEAMINASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV CCHHHHHHHHHHHCEEEECCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHE VALRRAGGLATGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR EEEHHCCCCEECEEEEEEECCHHCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHH EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR HHHHHHHHHHHHHHHHHEEECCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHH VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG EECCCHHEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR CCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure MNVEQVKSIDEAMGLAIEHSYQVKGTTYPNPPVGAVIVDPNGRIVGAGGTEPAGGDHAEV CCHHHHHHHHHHHCEEEECCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCCCCHHHE VALRRAGGLATGAIVVVTMEPCNHYGKTPPCVNALIEARVGTVVYAVADPNGIAGGGAGR EEEHHCCCCEECEEEEEEECCHHCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCC LSAAGLQVRSGVLAEQVAAGPLREWLHKQRTGLPHVTWKYATSIDGRSAAADGSSQWISS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHH EAARLDLHRRRAIADAILVGTGTVLADDPALTARLADGSLAPQQPLRVVVGKRDIPPEAR HHHHHHHHHHHHHHHHHEEECCCEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHH VLNDEARTMMIRTHEPMEVLRALSDRTDVLLEGGPTLAGAFLRAGAINRILAYVAPILLG EECCCHHEEEEECCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC GPVTAVDDVGVSNITNALRWQFDSVEKVGPDLLLSLVAR CCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]