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The map label for this gene is rpe [H]

Identifier: 121637338

GI number: 121637338

Start: 1609287

End: 1609985

Strand: Direct

Name: rpe [H]

Synonym: BCG_1469

Alternate gene names: 121637338

Gene position: 1609287-1609985 (Clockwise)

Preceding gene: 121637337

Following gene: 121637339

Centisome position: 36.79

GC content: 67.1

Gene sequence:

>699_bases
GTGTCGCTCATGGCCGGTAGCACGGGGGGACCGCTGATAGCGCCGTCGATCCTAGCCGCTGATTTCGCCAGACTCGCGGA
CGAAGCGGCCGCGGTCAACGGCGCCGACTGGTTGCATGTAGACGTGATGGACGGTCACTTCGTGCCAAACCTGACCATCG
GCCTGCCGGTGGTGGAGAGCCTGCTGGCGGTCACCGACATCCCGATGGATTGCCATCTAATGATCGACAACCCGGACCGG
TGGGCTCCGCCGTATGCCGAGGCGGGCGCCTACAACGTCACCTTCCACGCGGAGGCCACCGACAACCCGGTCGGCGTGGC
CCGCGATATCCGGGCCGCGGGGGCCAAAGCCGGGATCAGCGTGAAGCCGGGGACCCCGCTGGAGCCATACCTGGACATCC
TGCCCCATTTCGACACCCTGCTCGTCATGTCGGTAGAGCCTGGCTTCGGTGGCCAGCGGTTCATTCCCGAGGTGCTGAGC
AAGGTGCGTGCGGTGCGCAAGATGGTCGACGCGGGCGAGCTGACGATCCTGGTCGAGATCGACGGCGGCATCAACGACGA
CACGATTGAGCAGGCTGCCGAGGCCGGCGTCGACTGCTTTGTCGCCGGATCGGCGGTGTACGGCGCCGATGACCCGGCCG
CGGCGGTTGCGGCACTACGGCGACAGGCCGGTGCCGCCTCACTCCACCTGAGCCTATGA

Upstream 100 bases:

>100_bases
GCCCCACGTTCAGCTGTGGCCGCACCGGCACGGTACCGACGCCATGTTCGCCGCGGCGTTGCGCCGCCTGACGTGAGGTT
CGCCGCAGCGGCTCAGTAAT

Downstream 100 bases:

>100_bases
ACGTGGAGCAGGTCAAGAGCATCGACGAGGCTATGGGTCTCGCCATCGAGCACTCCTACCAGGTCAAAGGCACGACTTAT
CCAAACCCCCCAGTGGGGGC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDR
WAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLS
KVRAVRKMVDAGELTILVEIDGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL

Sequences:

>Translated_232_residues
MSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDR
WAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLS
KVRAVRKMVDAGELTILVEIDGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
>Mature_231_residues
SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRW
APPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSK
VRAVRKMVDAGELTILVEIDGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=227, Percent_Identity=44.0528634361233, Blast_Score=188, Evalue=3e-48,
Organism=Homo sapiens, GI219879828, Length=227, Percent_Identity=42.7312775330396, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI24307923, Length=179, Percent_Identity=36.3128491620112, Blast_Score=124, Evalue=8e-29,
Organism=Escherichia coli, GI1789788, Length=220, Percent_Identity=45.9090909090909, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1790523, Length=195, Percent_Identity=34.8717948717949, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790754, Length=210, Percent_Identity=31.9047619047619, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=223, Percent_Identity=45.7399103139013, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322341, Length=227, Percent_Identity=42.7312775330396, Blast_Score=198, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24586301, Length=214, Percent_Identity=44.392523364486, Blast_Score=174, Evalue=4e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24106; Mature: 23974

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECHHHHHH
LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS
HHHHHCCCCEEEEEECCCCCCCCCCHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEE
VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI
ECCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
CCCCCHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure 
SLMAGSTGGPLIAPSILAADFARLADEAAAVNGADWLHVDVMDGHFVPNLTIGLPVVES
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECHHHHHH
LLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAEATDNPVGVARDIRAAGAKAGIS
HHHHHCCCCEEEEEECCCCCCCCCCHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCEE
VKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKMVDAGELTILVEI
ECCCCCCCHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
DGGINDDTIEQAAEAGVDCFVAGSAVYGADDPAAAVAALRRQAGAASLHLSL
CCCCCHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]