Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636931
Identifier: 121636931
GI number: 121636931
Start: 1148917
End: 1150428
Strand: Reverse
Name: 121636931
Synonym: BCG_1059c
Alternate gene names: NA
Gene position: 1150428-1148917 (Counterclockwise)
Preceding gene: 121636933
Following gene: 121636929
Centisome position: 26.3
GC content: 66.34
Gene sequence:
>1512_bases GTGGTACCCGTCGTCAGCCCCGGCCCGCTGGTGCCGGTCGCGGATTTCGGGCCCCTGGACCGGTTACGCGGCTGGATCGT GACCGGCCTGATCACGCTGCTGGCCACGGTGACCCGGTTCCTGAACCTGGGCTCGCTGACCGATGCCGGCACCCCCATCT TCGACGAGAAGCATTACGCACCCCAGGCCTGGCAGGTGCTGAACAACCATGGGGTGGAAGACAACCCCGGGTACGGCCTG GTGGTTCACCCGCCGGTCGGTAAGCAGCTGATCGCGATCGGGGAGGCCATCTTCGGTTACAACGGATTCGGCTGGCGGTT CACCGGCGCCCTGCTGGGTGTGCTCCTGGTGGCGCTGGTGGTGCGGATCGTGCGGCGGATCAGCCGGTCGACATTGGTCG GCGCCATCGCCGGGGTGCTGCTGATCTGCGACGGGGTCAGCTTCGTCACCGCGCGGACCGCGCTGCTGGACGGCTTCCTG ACGTTCTTCGTCGTCGCGGCGTTCGGCGCGCTCATCGTCGACCGCGATCAGGTTCGCGAACGGATGCACATCGCTCTGCT GGCCGGCCGCAGCGCCGCCACCGTGTGGGGACCGCGGGTGGGTGTGCGCTGGTGGCGGTTCGGCGCCGGGGTGCTGCTGG GATTGGCTTGCGCCACCAAGTGGTCCGGCGTGTACTTCGTGCTGTTCTTCGGCGCGATGGCGCTGGCGTTCGACGTGGCG GCGCGACGTCAGTACCAAGTGCAAAGACCGTGGCTGGGGACAGTGCGGCGTGACGTGCTTCCCAGCGGGTATGCGCTGGG GTTGATCCCGTTCGCGGTCTATCTGGCCACCTACGCTCCGTGGTTCGCGTCCGAGACCGCGATCGATCGGCATGCGGTCG GTCAAGCGGTCGGTCGCAACTCGGTTGTTCCGCTGCCCGACGCCGTGCGCTCGCTCTGGCACTACACCGCCAAAGCGTTC CACTTCCACGCGGGCCTGACGAATTCCGCAGGCAACTACCACCCTTGGGAATCCAAACCGTGGACCTGGCCCATGTCGTT GCGGCCGGTGCTGTACGCCATCGACCAGCAAGACGTTGCAGGCTGCGGCGCACAGTCGTGCGTCAAGGCCGAGATGCTGG TCGGCACGCCCGCGATGTGGTGGCTGGCGGTGCCAGTCCTGGCATACGCGGGGTGGCGTATGTTTGTGCGCCGGGACTGG CGTTATGCGGTGGTCCTGGTCGGCTACTGCGCCGGTTGGCTGCCGTGGTTCGCCGACATCGACCGGCAGATGTACTTCTT CTACGCAGCGACCATGGCGCCATTTCTGGTGATGGGCATTTCGCTGGTTCTCGGCGATATCCTCTATCACCCCGGTCAGG GCTCCGAACGACGCACACTGGGGCTGATCGTCGTCTGCTGCTACGTGGCCCTCGTGGTGACGAACTTTGCGTGGCTGTAT CCGGTGCTCACCGGTCTGCCAATCTCACAACAGACCTGGAACCTGGAGATCTGGCTGCCCAGCTGGCGGTGA
Upstream 100 bases:
>100_bases CAGGCGACCAGAGGACATGACGGACAGCCTACGATCGACACCGATGACCGCCCGGCCCCCAGAATCCTGTGTCCTGGCCA AGGACCGCCCCGAGGAGCCT
Downstream 100 bases:
>100_bases TCTGCGGCGCCGCCAGGCGCCGAAATCGCCACTCCTAAAGCGGATCGCGGGCGGCCGGACAGGACATGCAGCGGGGCCCG CCACGGCCGGTACCCAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGL VVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVLLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFL TFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVA ARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAF HFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDW RYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLY PVLTGLPISQQTWNLEIWLPSWR
Sequences:
>Translated_503_residues MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGL VVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVLLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFL TFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVA ARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAF HFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDW RYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLY PVLTGLPISQQTWNLEIWLPSWR >Mature_503_residues MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYAPQAWQVLNNHGVEDNPGYGL VVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVLLVALVVRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFL TFFVVAAFGALIVDRDQVRERMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVA ARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRNSVVPLPDAVRSLWHYTAKAF HFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVAGCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDW RYAVVLVGYCAGWLPWFADIDRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLY PVLTGLPISQQTWNLEIWLPSWR
Specific function: Unknown
COG id: COG1928
COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 55546; Mature: 55546
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVLLVALV HHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVA HHHHHEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRN HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCC SVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVA CCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHH GCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDWRYAVVLVGYCAGWLPWFADI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVLTGLPISQQTWNLEIWLPSWR HHHHCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MVPVVSPGPLVPVADFGPLDRLRGWIVTGLITLLATVTRFLNLGSLTDAGTPIFDEKHYA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PQAWQVLNNHGVEDNPGYGLVVHPPVGKQLIAIGEAIFGYNGFGWRFTGALLGVLLVALV HHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH VRIVRRISRSTLVGAIAGVLLICDGVSFVTARTALLDGFLTFFVVAAFGALIVDRDQVRE HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RMHIALLAGRSAATVWGPRVGVRWWRFGAGVLLGLACATKWSGVYFVLFFGAMALAFDVA HHHHHEEECCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARRQYQVQRPWLGTVRRDVLPSGYALGLIPFAVYLATYAPWFASETAIDRHAVGQAVGRN HHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCC SVVPLPDAVRSLWHYTAKAFHFHAGLTNSAGNYHPWESKPWTWPMSLRPVLYAIDQQDVA CCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHEEECCHHHH GCGAQSCVKAEMLVGTPAMWWLAVPVLAYAGWRMFVRRDWRYAVVLVGYCAGWLPWFADI CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH DRQMYFFYAATMAPFLVMGISLVLGDILYHPGQGSERRTLGLIVVCCYVALVVTNFAWLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PVLTGLPISQQTWNLEIWLPSWR HHHHCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]