Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636933
Identifier: 121636933
GI number: 121636933
Start: 1151378
End: 1152637
Strand: Reverse
Name: 121636933
Synonym: BCG_1061c
Alternate gene names: NA
Gene position: 1152637-1151378 (Counterclockwise)
Preceding gene: 121636934
Following gene: 121636931
Centisome position: 26.35
GC content: 74.6
Gene sequence:
>1260_bases GTGTCTATCTCGTGTCGAGTTCGAGAGGGGTTTGTAATGAGACTCGCGATCGTGGGCACCGCGGCTGCTGCCGCGATAGG GGGAACGCTGGCGGTGGCACCGTTGACGTTGTCCACCCCGGAGCGGGTCGCGGGCGGCACCTGCAGCGCCGGCCAGCAGT GCGATCGGCTGGCTGCGGTCCTGATGCCCGACACCGCGACACCATCGGGGCCGGCCGCAGCGGAGCACGCGGTGCCGGCG CCGTTCGAGCCGGTCGCCGACACGATCGCGCCGGGATTGGTTCCGCGGCCGGGTGTACCGGCGGCTGCCGCCGTGCCCAG GGTGGGCCCGCCAGCCGTTCCCGGCCTACCCAACATTCCCGGTGCGGCCGGCCCGGCCCTGCCTCCCCCACCGGCCCTGC CGAACCTGGCCGCGCCGAGCGTACCTGGCGTCGGCATCCCGGGCATCGGCATCCCGGGCATCGGCATCCCGGGCATCGGC ATCCCCGGCGTACCCGACCCAATCACCGGGGTGAACACCGCTGCCGCGGTCGTGAACGGTGTCCTGGGTGTGGGAGGCAC GGCGGCGGGGGTGGTGACCGCGAGCGCGGTGGCCGTCACCTATCTCGTGCTTGCGGTTAACGCGCTGGAGTCTTCCGGCA TCCTGCCGACGGCCCGCGGAACAGCCAGCACGGTGGCCTCCCTGCTGCTGCCCGGGGCGCAATCGGCGGCGGCCGCTCTG CCGGCTGTGGGGCTGCCCGCCCTGCCGGGCGTGACGCCGGCGAGTCTGCTCGCGATGGCGGCGGCCGCCGGCCTGCCAGG CGTGGGTTTTCCGAGTCTGCCAGGTGTGTCGCCGACCGACCTGATGGCGATGGCGGCCGCGGCCGGTCTGCCGACGAGTT TGCCGGGTCTGGCGGGGATGTCGCCGGCGGAGCTGACGGCGCTGGTGGCAGGTGGTCTGCCGATGCTGGCGGCCGCTGGT CTGCCGGCTGGTCTGGCGGGGGTGGATCCGGCGACGCTGGCTGCGGCGCTGCCGGCGCTGGCGGCAGGTGGTCTACCGCC GGGCCTCCCGGCGCTGCCAGGCGTGGATCCTGCGGCGCTGGCTGCGGCGCTGCCGGCGCTGGCGGCCGGCCTGCCGGCAC TGCCAGCGGGTCTGCCGCCGTTACCGGCCGTGCCCGCATTGCCGGCACCTCCCCCACTGCCGGGACCGCCTCCGCTGCCG GCGCTCCCGTCGCGTCTGTGCACACCCGGATTCGGTCCCATCGGGGTGTGTATCCCCTAA
Upstream 100 bases:
>100_bases GCTCGGTTAGCCAGCAAAGTGCGGTAGCCCAGCGGGCGGCGGAAATTGGCATAACGCCCACATGGTGTGCCGGGTGCGCC TAAGCTCGGGCCATCGACGC
Downstream 100 bases:
>100_bases CCTGACCGACTACGGCTGCGCTGGCCCGCCGGTTTCCCGCCGTGATTGCAGCACCGCGTCGTAAAGCTGGCGGGTGCGCA CCCCCGGATGTGCCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MSISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSAGQQCDRLAAVLMPDTATPSGPAAAEHAVPA PFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGPALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIG IPGVPDPITGVNTAAAVVNGVLGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAAL PAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAGMSPAELTALVAGGLPMLAAAG LPAGLAGVDPATLAAALPALAAGGLPPGLPALPGVDPAALAAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPLP ALPSRLCTPGFGPIGVCIP
Sequences:
>Translated_419_residues MSISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSAGQQCDRLAAVLMPDTATPSGPAAAEHAVPA PFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGPALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIG IPGVPDPITGVNTAAAVVNGVLGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAAL PAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAGMSPAELTALVAGGLPMLAAAG LPAGLAGVDPATLAAALPALAAGGLPPGLPALPGVDPAALAAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPLP ALPSRLCTPGFGPIGVCIP >Mature_418_residues SISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSAGQQCDRLAAVLMPDTATPSGPAAAEHAVPAP FEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIPGAAGPALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGI PGVPDPITGVNTAAAVVNGVLGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAALP AVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAGMSPAELTALVAGGLPMLAAAGL PAGLAGVDPATLAAALPALAAGGLPPGLPALPGVDPAALAAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPLPA LPSRLCTPGFGPIGVCIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38786; Mature: 38655
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSAGQQCDRLAAV CCCCEEECCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHH LMPDTATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIP HCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC GAAGPALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPDPITGVNTAAAVVNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VLGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH PAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAGM CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC SPAELTALVAGGLPMLAAAGLPAGLAGVDPATLAAALPALAAGGLPPGLPALPGVDPAAL CHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPLPALPSRLCTPGFGPIGVCIP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure SISCRVREGFVMRLAIVGTAAAAAIGGTLAVAPLTLSTPERVAGGTCSAGQQCDRLAAV CCCEEECCCCEEEHHHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCCHHHHHHHHHH LMPDTATPSGPAAAEHAVPAPFEPVADTIAPGLVPRPGVPAAAAVPRVGPPAVPGLPNIP HCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC GAAGPALPPPPALPNLAAPSVPGVGIPGIGIPGIGIPGIGIPGVPDPITGVNTAAAVVNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VLGVGGTAAGVVTASAVAVTYLVLAVNALESSGILPTARGTASTVASLLLPGAQSAAAAL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH PAVGLPALPGVTPASLLAMAAAAGLPGVGFPSLPGVSPTDLMAMAAAAGLPTSLPGLAGM CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC SPAELTALVAGGLPMLAAAGLPAGLAGVDPATLAAALPALAAGGLPPGLPALPGVDPAAL CHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH AAALPALAAGLPALPAGLPPLPAVPALPAPPPLPGPPPLPALPSRLCTPGFGPIGVCIP HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA