Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636929
Identifier: 121636929
GI number: 121636929
Start: 1147020
End: 1147637
Strand: Reverse
Name: 121636929
Synonym: BCG_1057c
Alternate gene names: NA
Gene position: 1147637-1147020 (Counterclockwise)
Preceding gene: 121636931
Following gene: 121636919
Centisome position: 26.23
GC content: 66.5
Gene sequence:
>618_bases ATGTGCGATAAGCTTGGCGGCGTGGCGATCGCGGTTCAAGGCGCGCTCTTCGAGCACAACGAGCGAAGACAGCTCGGCGA CGGAGCCTTTATCGACATCCGTTCGGGCTGGCTGACCGGCGGCGAAGAACTGCTGGACGCGTTGTTGTCGACGGTGCCGT GGCGAGCCGAGCGCCGTCAGATGTACGACCGGGTGGTCGATGTGCCGCGGCTGGTGAGTTTTCACGACCTGACCATCGAA GATCCGCCGCATCCGCAGCTGGCGCGGATGCGCCGGCGGCTCAACGACATCTACGGCGGCGAACTGGGTGAGCCCTTCAC CACCGCCGGGCTGTGCTACTACCGCGACGGCTCTGACAGCGTCGCCTGGCATGGCGACACCATTGGTCGCGGCAGCACTG AGGACACTATGGTGGCGATCGTCAGCCTCGGCGCCACCCGCGTCTTCGCGCTGCGGCCGCGTGGCCGCGGTCCATCGTTG CGACTGCCGTTGGCGCATGGCGATCTATTGGTGATGGGCGGATCGTGTCAACGCACCTTCGAGCATGCGGTGCCCAAGAC ATCGGCGCCGACGGGTCCGCGCGTGAGCATCCAGTTCCGGCCGCGCGACGTCCGCTAA
Upstream 100 bases:
>100_bases GGCGGTGCAGGATGACCACTCTTAGCGCGCCGACCTCGGAATTTGACCCCAATTCGACACCCACAGGTCAAACCGTAGCC GGGGCGGCGCCATCGAACGA
Downstream 100 bases:
>100_bases CTCGGTCAACCCCGGACCGCGGCCACCGCCTGTACGAGCAGATCGCGGGCGCGTTGCGTATCGACCCGCGCAACCGGCCG TCCAGGGATTACCAGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA-N1-Methyladenine Dioxygenase; 2OG-Fe(II) Oxygenase; DNA Repair System Specific For Alkylated DNA; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; LOW QUALITY PROTEIN Alkylated DNA Repair Protein; Alkylated DNA Repair Protein-Like Protein
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE DPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSL RLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR
Sequences:
>Translated_205_residues MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE DPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSL RLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR >Mature_205_residues MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE DPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSL RLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR
Specific function: Unknown
COG id: COG3145
COG function: function code L; Alkylated DNA repair protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21040275, Length=193, Percent_Identity=30.0518134715026, Blast_Score=79, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22648; Mature: 22648
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ CCCCCCCEEEEEECHHHCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHH MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS HHHHHHCCHHHHEEECEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF EEECCCCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEECCCCHHHH EHAVPKTSAPTGPRVSIQFRPRDVR HHCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ CCCCCCCEEEEEECHHHCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHH MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS HHHHHHCCHHHHEEECEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF EEECCCCCCCCCCCHHEEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEEECCCCHHHH EHAVPKTSAPTGPRVSIQFRPRDVR HHCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA