Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636369
Identifier: 121636369
GI number: 121636369
Start: 576190
End: 576636
Strand: Reverse
Name: 121636369
Synonym: BCG_0494c
Alternate gene names: NA
Gene position: 576636-576190 (Counterclockwise)
Preceding gene: 121636370
Following gene: 121636365
Centisome position: 13.18
GC content: 57.05
Gene sequence:
>447_bases ATGTCTCGGCTGAGTTCCATCCTGCGTGCCGGCGCGGCATTTCTGGTTCTCGGCATCGCCGCTGCGACATTTCCACAAAG CGCGGCAGCCGACTCCACGGAAGACTTTCCAATACCTCGCCGGATGATCGCAACCACCTGCGACGCCGAACAATATCTGG CGGCGGTGCGGGATACCAGTCCGGTGTACTACCAGCGGTACATGATCGACTTCAACAACCATGCAAACCTTCAGCAAGCG ACGATCAACAAGGCGCACTGGTTCTTCTCGCTGTCACCGGCGGAGCGCCGAGACTACTCCGAACACTTTTACAATGGCGA TCCGCTGACGTTTGCCTGGGTCAATCACATGAAAATCTTCTTCAACAACAAGGGCGTCGTCGCTAAAGGGACCGAGGTGT GCAATGGATACCCAGCCGGCGACATGTCGGTGTGGAACTGGGCCTAA
Upstream 100 bases:
>100_bases ACGCACGTCATCACTCCTGATGGGAGCATGTAGTGAGACAGACTATGAACCTTGTCGTCTGCCCGCCTCGAGGCGCCCCA AAAGTGCTACGGTAACCACT
Downstream 100 bases:
>100_bases GTCCGGCCTAAAGCTAACCGGCGTCAAAGCGCGGTCGTTTGCAACGAACCCGGAAATGTTGTCCACCATTCGGGGGACAG CCCGTTGGGCCCATCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIATTCDAEQYLAAVRDTSPVYYQRYMIDFNNHANLQQA TINKAHWFFSLSPAERRDYSEHFYNGDPLTFAWVNHMKIFFNNKGVVAKGTEVCNGYPAGDMSVWNWA
Sequences:
>Translated_148_residues MSRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIATTCDAEQYLAAVRDTSPVYYQRYMIDFNNHANLQQA TINKAHWFFSLSPAERRDYSEHFYNGDPLTFAWVNHMKIFFNNKGVVAKGTEVCNGYPAGDMSVWNWA >Mature_147_residues SRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIATTCDAEQYLAAVRDTSPVYYQRYMIDFNNHANLQQAT INKAHWFFSLSPAERRDYSEHFYNGDPLTFAWVNHMKIFFNNKGVVAKGTEVCNGYPAGDMSVWNWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16640; Mature: 16509
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIATTCDAEQYLAAVRDTS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC PVYYQRYMIDFNNHANLQQATINKAHWFFSLSPAERRDYSEHFYNGDPLTFAWVNHMKIF CEEEEEEEEECCCCCCCHHHHCCCEEEEEEECCHHHCCHHHHCCCCCCEEEEEEEEEEEE FNNKGVVAKGTEVCNGYPAGDMSVWNWA ECCCCEEEECCHHCCCCCCCCCCCCCCC >Mature Secondary Structure SRLSSILRAGAAFLVLGIAAATFPQSAAADSTEDFPIPRRMIATTCDAEQYLAAVRDTS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCC PVYYQRYMIDFNNHANLQQATINKAHWFFSLSPAERRDYSEHFYNGDPLTFAWVNHMKIF CEEEEEEEEECCCCCCCHHHHCCCEEEEEEECCHHHCCHHHHCCCCCCEEEEEEEEEEEE FNNKGVVAKGTEVCNGYPAGDMSVWNWA ECCCCEEEECCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA