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The map label for this gene is mmpS4

Identifier: 121636365

GI number: 121636365

Start: 572303

End: 572725

Strand: Reverse

Name: mmpS4

Synonym: BCG_0490c

Alternate gene names: 121636365

Gene position: 572725-572303 (Counterclockwise)

Preceding gene: 121636369

Following gene: 121636364

Centisome position: 13.09

GC content: 56.03

Gene sequence:

>423_bases
GTGCTAATGCGGACTTGGATTCCACTGGTCATCCTGGTGGTGGTCATCGTCGGGGGCTTCACCGTGCACCGGATCCGCGG
CTTCTTCGGCTCCGAAAACCGCCCGTCGTACTCCGACACCAACCTGGAAAACAGCAAACCATTCAACCCTAAACACCTGA
CTTACGAGATCTTCGGACCCCCCGGAACAGTCGCCGACATTAGTTATTTCGACGTCAATTCCGAGCCGCAACGGGTCGAT
GGAGCGGTGCTACCGTGGTCATTGCATATCACGACAAACGACGCGGCGGTGATGGGAAATATCGTGGCACAAGGTAATAG
CGACAGCATTGGCTGCCGAATCACGGTAGACGGCAAGGTCAGGGCCGAGAGGGTTTCCAACGAAGTCAACGCCTATACTT
ACTGCTTGGTGAAGTCCGCGTGA

Upstream 100 bases:

>100_bases
TAGTTGCGTTCAAGTAGCGACCAGCTCGAACGGATTTTGAAAGTTGGGTATCGTCCGCCGTACCACTGCCAACCGGTGAA
GGGGATCTGAGATTTTCAAG

Downstream 100 bases:

>100_bases
GTACTAAATTCGCGAACGACTCCAATACCAACGCTCGCCCCGAAAAGCCATTCATCGCCAGGATGATCCACGCCTTTGCG
GTACCGATCATCCTTGGCTG

Product: putative membrane protein mmpS4

Products: NA

Alternate protein names: PGB14T-X

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVD
GAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA

Sequences:

>Translated_140_residues
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVD
GAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA
>Mature_140_residues
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVD
GAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MMPS4_MYCBO (P0A5K3)

Other databases:

- EMBL:   BX248335
- RefSeq:   NP_854122.1
- ProteinModelPortal:   P0A5K3
- EnsemblBacteria:   EBMYCT00000017295
- GeneID:   1091486
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb0459c
- GeneTree:   EBGT00050000015314
- HOGENOM:   HBG566824
- OMA:   TAVGSIM
- ProtClustDB:   CLSK2299981
- BioCyc:   MBOV233413:MB0459C-MONOMER
- InterPro:   IPR008693

Pfam domain/function: PF05423 Mycobact_memb

EC number: NA

Molecular weight: Translated: 15404; Mature: 15404

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x134702ec)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP
CCCHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV
CCCEEEEEEEECCCCCCCCCCEECCEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCE
RAERVSNEVNAYTYCLVKSA
EEHHHCCCCCEEEEEEEECH
>Mature Secondary Structure
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGP
CCCHHHHHHHHHHHHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
PGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKV
CCCEEEEEEEECCCCCCCCCCEECCEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCE
RAERVSNEVNAYTYCLVKSA
EEHHHCCCCCEEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972