Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583560
Identifier: 121583560
GI number: 121583560
Start: 18290
End: 18595
Strand: Reverse
Name: 121583560
Synonym: Pnap_4989
Alternate gene names: NA
Gene position: 18595-18290 (Counterclockwise)
Preceding gene: 121583561
Following gene: 121583559
Centisome position: 86.04
GC content: 56.54
Gene sequence:
>306_bases ATGAAGCCAAAGCCGCAGCTTGAGTGGCGTCAGCAGGCGATTGATGACCTGGTGGAAATTGTCGAGTACATCGCCGAAGA CAACCCCGACGCGGCACAAGAACTCAAGGACGAAATTGAGGAAAAGGCGGCAAAGTTGCCCGATCACCCGAAGCTCTACA AACCTTCGCCTCGCGTGAAGGGCATGCGTGAGTTGGTGGCCAGGAGCAATTACATCGTGCTCTATCGGGAGACGCCGACG CTGGTGGAGGTGGTGAACGTGTTCCACGCCCGCCAGCAGTGGCCCACGAGAAAAAAAGAGACTTAG
Upstream 100 bases:
>100_bases CAGCAAGCCGATGCGTCGCTGGCCGACACGCGGCCCAACGTTTCGCACGAGCAGGCCATGTCCAGCGTTCAAGCAGTGAT CGACACGAAACGCAAGAAGC
Downstream 100 bases:
>100_bases CATTAGCGGCTCTGTCAGGTGCTGATACACCCGGCAAAGCCTAACCAAATCCAACTGAGTAAGAGTTAAAAATGGCTGAA GACAAGAATACCAAAAAGCG
Product: addiction module antitoxin
Products: NA
Alternate protein names: Plasmid Stabilization System Protein; Plasmid Stabilization System; Stability Determinant; Addiction Module xin RelE/StbE Family; Plasmid Stabilization System Protein RelE/ParE Family; Plasmid Stabilisation System Protein; Addiction Module xin RelE/StbE; Plasmid Stabilization-Like Protein Prophage; Addiction Module xin RelE/StbE Family Protein
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT LVEVVNVFHARQQWPTRKKET
Sequences:
>Translated_101_residues MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT LVEVVNVFHARQQWPTRKKET >Mature_101_residues MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVKGMRELVARSNYIVLYRETPT LVEVVNVFHARQQWPTRKKET
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11895; Mature: 11895
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH GMRELVARSNYIVLYRETPTLVEVVNVFHARQQWPTRKKET HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKPKPQLEWRQQAIDDLVEIVEYIAEDNPDAAQELKDEIEEKAAKLPDHPKLYKPSPRVK CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH GMRELVARSNYIVLYRETPTLVEVVNVFHARQQWPTRKKET HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA