Click here to switch to the map view.

The map label for this gene is 121583559

Identifier: 121583559

GI number: 121583559

Start: 17280

End: 18218

Strand: Reverse

Name: 121583559

Synonym: Pnap_4988

Alternate gene names: NA

Gene position: 18218-17280 (Counterclockwise)

Preceding gene: 121583560

Following gene: 121583558

Centisome position: 84.3

GC content: 49.09

Gene sequence:

>939_bases
ATGGCTGAAGACAAGAATACCAAAAAGCGCACCGAGGTAGAAATTCAGGCAATGCTTGCAAAACTGCGAGCAAAAGGCAA
AGAAAACCAGAACGAAATACGCGCAGCGATTGTTGAAGACCTGAAAAAATTCAAAGAGCCGCCACCCTCCGTCTTGGCAC
CAGTGAAACATCTCCAAAAAGATTTTTTCATCGCCGACATTTTTGATACAGCGATCAAAGACGACATGGCAAGCATGGAA
CATCCATTGTTTGCACTCAAAGCCGGTGACATGCGCGTGCGTGTGTACGAGCGAAACGGCAACAGCGTGACGATCAAGCC
AGGTTCTGACGGCTGCGCCACGATTCACGACAAAGACGTTTGGATTTACTGCACGAGCCAACTTATCGAAGCGATGAATC
GTGGGCGTGATGACGTTAGTCGCACAGTGAGATTCACGGCGTACAACTTTCTTGTCACGACAAATAGACCTGTTGATGGC
GACAGTTATAAGCGCATGGGTGACGCATTGGCAAGGCTGCGCGGCACGAGCATTGAAACAAACATCATCACAGATGGACA
ACGTGAGAGAGCCGGTTTTGGTTTGATCGACTCCTGGCGAGTTATTGAAAAAACAGCAGGCGGACGGATGGTTGCCGTTG
AAGTAACTTTATCGGACTGGCTGTATCGATCAATTAAAGCAAAACAAGTGCTAACGCTATCGCCGGACTATTTCAGAATC
CGTAAGCCAGCAGATCGACGCATGTACGAGCTGGCTAGAAAGCACTGTGGCGCCCAACGGCAATGGCAATGCACGATTAA
AACGCTGTACGAAAAAAGCGGCAGCACTGCAAATTTGCGAGAGTTTCGCCGCACAGTAAAAACGCTTGTCGAGTCCGATG
AGTTGCCAGACTACAAGGTCGGCATGGTTGACGATATGGTGACATTCATTCGCCGGTAG

Upstream 100 bases:

>100_bases
AGTGGCCCACGAGAAAAAAAGAGACTTAGCATTAGCGGCTCTGTCAGGTGCTGATACACCCGGCAAAGCCTAACCAAATC
CAACTGAGTAAGAGTTAAAA

Downstream 100 bases:

>100_bases
GCACGTACTTTTAGATGCGGTTATCCACAAAGGCTGGATAAAAAAACACGTATTTTCACACACAAAATCTGTGGATTGGC
TCGTGGTTTCACACACAAAA

Product: plasmid replication initiator protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAEDKNTKKRTEVEIQAMLAKLRAKGKENQNEIRAAIVEDLKKFKEPPPSVLAPVKHLQKDFFIADIFDTAIKDDMASME
HPLFALKAGDMRVRVYERNGNSVTIKPGSDGCATIHDKDVWIYCTSQLIEAMNRGRDDVSRTVRFTAYNFLVTTNRPVDG
DSYKRMGDALARLRGTSIETNIITDGQRERAGFGLIDSWRVIEKTAGGRMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRI
RKPADRRMYELARKHCGAQRQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDYKVGMVDDMVTFIRR

Sequences:

>Translated_312_residues
MAEDKNTKKRTEVEIQAMLAKLRAKGKENQNEIRAAIVEDLKKFKEPPPSVLAPVKHLQKDFFIADIFDTAIKDDMASME
HPLFALKAGDMRVRVYERNGNSVTIKPGSDGCATIHDKDVWIYCTSQLIEAMNRGRDDVSRTVRFTAYNFLVTTNRPVDG
DSYKRMGDALARLRGTSIETNIITDGQRERAGFGLIDSWRVIEKTAGGRMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRI
RKPADRRMYELARKHCGAQRQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDYKVGMVDDMVTFIRR
>Mature_311_residues
AEDKNTKKRTEVEIQAMLAKLRAKGKENQNEIRAAIVEDLKKFKEPPPSVLAPVKHLQKDFFIADIFDTAIKDDMASMEH
PLFALKAGDMRVRVYERNGNSVTIKPGSDGCATIHDKDVWIYCTSQLIEAMNRGRDDVSRTVRFTAYNFLVTTNRPVDGD
SYKRMGDALARLRGTSIETNIITDGQRERAGFGLIDSWRVIEKTAGGRMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRIR
KPADRRMYELARKHCGAQRQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDYKVGMVDDMVTFIRR

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 35725; Mature: 35594

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDKNTKKRTEVEIQAMLAKLRAKGKENQNEIRAAIVEDLKKFKEPPPSVLAPVKHLQK
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DFFIADIFDTAIKDDMASMEHPLFALKAGDMRVRVYERNGNSVTIKPGSDGCATIHDKDV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEEECCCCCCEEEECCCE
WIYCTSQLIEAMNRGRDDVSRTVRFTAYNFLVTTNRPVDGDSYKRMGDALARLRGTSIET
EEEEHHHHHHHHHCCHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
NIITDGQRERAGFGLIDSWRVIEKTAGGRMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRI
EEECCCCHHHCCCCCCCCHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCEEEEECCCCEEE
RKPADRRMYELARKHCGAQRQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDYKV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GMVDDMVTFIRR
CHHHHHHHHHCC
>Mature Secondary Structure 
AEDKNTKKRTEVEIQAMLAKLRAKGKENQNEIRAAIVEDLKKFKEPPPSVLAPVKHLQK
CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
DFFIADIFDTAIKDDMASMEHPLFALKAGDMRVRVYERNGNSVTIKPGSDGCATIHDKDV
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCEEEEECCCCCCEEEECCCE
WIYCTSQLIEAMNRGRDDVSRTVRFTAYNFLVTTNRPVDGDSYKRMGDALARLRGTSIET
EEEEHHHHHHHHHCCHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
NIITDGQRERAGFGLIDSWRVIEKTAGGRMVAVEVTLSDWLYRSIKAKQVLTLSPDYFRI
EEECCCCHHHCCCCCCCCHHHHHHCCCCEEEEEEEEHHHHHHHHHCCCEEEEECCCCEEE
RKPADRRMYELARKHCGAQRQWQCTIKTLYEKSGSTANLREFRRTVKTLVESDELPDYKV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
GMVDDMVTFIRR
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]